RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 BTCP35070 178 aa14.09□□□□□ -0.15
SF3A1-202ENST00000411423 SRPXP78539 464 aa14.09□□□□□ -0.15
SF3A1-202ENST00000411423 RBMS2Q15434 407 aaKnown RBP14.09□□□□□ -0.15
SF3A1-202ENST00000411423 PLECQ15149 4684 aaKnown RBP14.09□□□□□ -0.15
SF3A1-202ENST00000411423 LINC00854A0A1B0GVQ3 168 aa14.08□□□□□ -0.16
SF3A1-202ENST00000411423 RPS10-NUDT3A0A1W2PQS6 291 aa14.08□□□□□ -0.16
SF3A1-202ENST00000411423 RPL35AP18077 110 aaKnown RBP14.08□□□□□ -0.16
SF3A1-202ENST00000411423 CRYBB3P26998 211 aa14.08□□□□□ -0.16
SF3A1-202ENST00000411423 WFDC3Q8IUB2 231 aa14.08□□□□□ -0.16
SF3A1-202ENST00000411423 CENPSQ8N2Z9 138 aa14.08□□□□□ -0.16
SF3A1-202ENST00000411423 OR1S1Q8NH92 325 aa14.08□□□□□ -0.16
SF3A1-202ENST00000411423 NPIPB3Q92617 1050 aa14.08□□□□□ -0.16
SF3A1-202ENST00000411423 MS4A6AQ9H2W1 248 aa14.08□□□□□ -0.16
SF3A1-202ENST00000411423 MAP6D1Q9H9H5 199 aa14.08□□□□□ -0.16
SF3A1-202ENST00000411423 DUXBA0A1W2PPF3 345 aa14.07□□□□□ -0.16
SF3A1-202ENST00000411423 IFNA10P01566 189 aa14.07□□□□□ -0.16
SF3A1-202ENST00000411423 SLC25A4P12235 298 aa14.07□□□□□ -0.16
SF3A1-202ENST00000411423 OR10J1P30954 320 aa14.07□□□□□ -0.16
SF3A1-202ENST00000411423 OR1S2Q8NGQ3 325 aa14.07□□□□□ -0.16
SF3A1-202ENST00000411423 U3KQE9 123 aa14.07□□□□□ -0.16
SF3A1-202ENST00000411423 HYDINQ4G0P3 5121 aa14.07□□□□□ -0.16
SF3A1-202ENST00000411423 NDUFB6O95139 128 aa14.06□□□□□ -0.16
SF3A1-202ENST00000411423 IAPPP10997 89 aa14.06□□□□□ -0.16
SF3A1-202ENST00000411423 NPPCP23582 126 aa14.06□□□□□ -0.16
SF3A1-202ENST00000411423 USF2Q15853 346 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-202ENST00000411423 ACY3Q96HD9 319 aa14.06□□□□□ -0.16
SF3A1-202ENST00000411423 U3KQ87 197 aa14.06□□□□□ -0.16
SF3A1-202ENST00000411423 TENM2Q9NT68 2774 aa14.06□□□□□ -0.16
SF3A1-202ENST00000411423 TRAV30A0A087WSZ9 112 aa14.05□□□□□ -0.16
SF3A1-202ENST00000411423 MPTX1A8MV57 137 aa14.05□□□□□ -0.16
SF3A1-202ENST00000411423 HOXB5P09067 269 aa14.05□□□□□ -0.16
SF3A1-202ENST00000411423 YPEL3P61236 119 aaPredicted RBP14.05□□□□□ -0.16
SF3A1-202ENST00000411423 EWSR1Q01844 656 aaKnown RBP eCLIP14.05□□□□□ -0.16
SF3A1-202ENST00000411423 DEFB135Q30KP9 77 aa14.05□□□□□ -0.16
SF3A1-202ENST00000411423 GGNBP1Q5YKI7 109 aa14.05□□□□□ -0.16
SF3A1-202ENST00000411423 TRIQKQ629K1 86 aa14.05□□□□□ -0.16
SF3A1-202ENST00000411423 IGKV1D-37A0A075B6S9 117 aa14.04□□□□□ -0.16
SF3A1-202ENST00000411423 C9orf170A2RU37 121 aa14.04□□□□□ -0.16
SF3A1-202ENST00000411423 ADAP1O75689 374 aa14.04□□□□□ -0.16
SF3A1-202ENST00000411423 SLC25A6P12236 298 aa14.04□□□□□ -0.16
SF3A1-202ENST00000411423 IL7P13232 177 aa14.04□□□□□ -0.16
SF3A1-202ENST00000411423 P2RY1P47900 373 aa14.04□□□□□ -0.16
SF3A1-202ENST00000411423 METTL26Q96S19 204 aa14.04□□□□□ -0.16
SF3A1-202ENST00000411423 MAGT1Q9H0U3 335 aa14.04□□□□□ -0.16
SF3A1-202ENST00000411423 CACFD1Q9UGQ2 172 aa14.04□□□□□ -0.16
SF3A1-202ENST00000411423 NAP1L6A6NFF2 107 aa14.03□□□□□ -0.16
SF3A1-202ENST00000411423 PLA2G10O15496 165 aa14.03□□□□□ -0.16
SF3A1-202ENST00000411423 GAMTQ14353 236 aa14.03□□□□□ -0.16
SF3A1-202ENST00000411423 LEMD1Q68G75 181 aa14.03□□□□□ -0.16
SF3A1-202ENST00000411423 ETFRF1Q6IPR1 90 aa14.03□□□□□ -0.16
SF3A1-202ENST00000411423 TMED3Q9Y3Q3 217 aa14.03□□□□□ -0.16
SF3A1-202ENST00000411423 DNAH1Q9P2D7 4330 aa14.02□□□□□ -0.16
SF3A1-202ENST00000411423 K7EQG2 157 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 TOMM40O96008 361 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 IFNA4P05014 189 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 IL4P05112 153 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 PSG1P11464 419 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 ANXA7P20073 488 aaKnown RBP14.02□□□□□ -0.17
SF3A1-202ENST00000411423 BMI1P35226 326 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 INPP1P49441 399 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 APOC4P55056 127 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 DEFB131AP59861 70 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 RPL11P62913 178 aaKnown RBP14.02□□□□□ -0.17
SF3A1-202ENST00000411423 Q6ZWC4 215 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 NOXA1Q86UR1 476 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 Q8WTZ3 238 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 GLMPQ8WWB7 406 aa14.02□□□□□ -0.17
SF3A1-202ENST00000411423 TRAV2A0A0B4J234 112 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 KIR2DL5BA0A0G2JN68 375 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 KIR2DL5BA0A0G2JPC4 375 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 PRSS46E5RG02 174 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 DNASE2O00115 360 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-202ENST00000411423 SPRY2O43597 315 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 HNRNPCP07910 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
SF3A1-202ENST00000411423 UBE2MP61081 183 aaKnown RBP14.01□□□□□ -0.17
SF3A1-202ENST00000411423 PAFAH1B2P68402 229 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 ZNF90Q03938 601 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 DHRS2Q13268 280 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 C16orf54Q6UWD8 224 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 KIR2DL5AQ8N109 375 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 KIR2DL5BQ8NHK3 375 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 DCANP1Q8TF63 244 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 RNF183Q96D59 192 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 NDUFA13Q9P0J0 144 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 RABAC1Q9UI14 185 aa14.01□□□□□ -0.17
SF3A1-202ENST00000411423 IGKV1OR2-108A0A075B7D4 117 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 A0A1W2PS18 150 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 FAM90A26D6RGX4 464 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 WRBO00258 174 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 SCGB2A1O75556 95 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 CD5P06127 495 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 OR4E1P0C645 316 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 RD3LP0DJH9 198 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 STXBP6Q8NFX7 210 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 OR51G1Q8NGK1 321 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 TMEM231Q9H6L2 316 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 TP53TG1Q9Y2A0 90 aa14□□□□□ -0.17
SF3A1-202ENST00000411423 A0A0J9YWU9 116 aa13.99□□□□□ -0.17
SF3A1-202ENST00000411423 UBE2CO00762 179 aa13.99□□□□□ -0.17
SF3A1-202ENST00000411423 SYNGR2O43760 224 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms