RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 IGKV1-16P04430 117 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 FKBP2P26885 142 aaKnown RBP2.86□□□□□ -1.95
LSM5-205ENST00000409952 RPL28P46779 137 aaKnown RBP2.86□□□□□ -1.95
LSM5-205ENST00000409952 DNLZQ5SXM8 178 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 PRR15Q8IV56 129 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 OR4C16Q8NGL9 310 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 PPTC7Q8NI37 304 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 YPEL2Q96QA6 119 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 PFDN5Q99471 154 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 SLC25A21Q9BQT8 299 aaPredicted RBP2.86□□□□□ -1.95
LSM5-205ENST00000409952 REREQ9P2R6 1566 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 NACAE9PAV3 2078 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 RALGAPA2Q2PPJ7 1873 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 SPATA31E1Q6ZUB1 1445 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 CEP152O94986 1710 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 TEX14Q8IWB6 1497 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 KIF1BO60333 1816 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 TRGV5A0A0B4J1U4 118 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 ARRDC5A6NEK1 342 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 GNRH2O43555 120 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 ZNF14P17017 642 aaPredicted RBP2.85□□□□□ -1.95
LSM5-205ENST00000409952 NFYAP23511 347 aaPredicted RBP2.85□□□□□ -1.95
LSM5-205ENST00000409952 UBE2BP63146 152 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 FOXF1Q12946 379 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 EIF3IQ13347 325 aaKnown RBP2.85□□□□□ -1.95
LSM5-205ENST00000409952 SPCS2Q15005 226 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 HMGN2P46Q86SG4 172 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 LHFPL1Q86WI0 220 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 RNF182Q8N6D2 247 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 PFN4Q8NHR9 129 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 HIST1H2BLQ99880 126 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 GINS4Q9BRT9 223 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 HIGD2AQ9BW72 106 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 TPT1P8Q9HAU6 139 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 OTORQ9NRC9 128 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 HSPB8Q9UJY1 196 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 NOTCH2Q04721 2471 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 NHSL1Q5SYE7 1610 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 DSCAMO60469 2012 aa2.85□□□□□ -1.95
LSM5-205ENST00000409952 SLIT3O75094 1523 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 COL27A1Q8IZC6 1860 aaPredicted RBP2.84□□□□□ -1.95
LSM5-205ENST00000409952 PEG3Q9GZU2 1588 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 SCN10AQ9Y5Y9 1956 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 IGKV2-28A0A075B6P5 120 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 C11orf86A6NJI1 115 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 GABARAPH6UMI1 98 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 TMEM256-PLSCR3K7ERE1 68 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 IGKV2D-28P01615 120 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 COX4I1P13073 169 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 LGALS3P17931 250 aaKnown RBP2.84□□□□□ -1.95
LSM5-205ENST00000409952 RNASE4P34096 147 aaKnown RBP2.84□□□□□ -1.95
LSM5-205ENST00000409952 EIF2B2P49770 351 aaKnown RBP2.84□□□□□ -1.95
LSM5-205ENST00000409952 MOBPQ13875 183 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 IFT20Q8IY31 132 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 SIGLECL1Q8N7X8 197 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 MRPL32Q9BYC8 188 aaKnown RBP2.84□□□□□ -1.95
LSM5-205ENST00000409952 OR2H1Q9GZK4 316 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 COPZ2Q9P299 210 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 PAIP2BQ9ULR5 123 aaKnown RBP2.84□□□□□ -1.95
LSM5-205ENST00000409952 TIMM9Q9Y5J7 89 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 MINOS1-NBL1R4GNA1 71 aa2.84□□□□□ -1.95
LSM5-205ENST00000409952 BCORL1Q5H9F3 1711 aa2.84□□□□□ -1.96
LSM5-205ENST00000409952 SCN4AP35499 1836 aa2.84□□□□□ -1.96
LSM5-205ENST00000409952 PPRC1Q5VV67 1664 aaKnown RBP2.83□□□□□ -1.96
LSM5-205ENST00000409952 TRAV7A0A075B6U4 112 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 MEIS3P1A6NDR6 274 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 SUPT4H1P63272 117 aaKnown RBP2.83□□□□□ -1.96
LSM5-205ENST00000409952 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 C22orf39Q6P5X5 142 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 LYZL1Q6UWQ5 148 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 MSRB3Q8IXL7 192 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 Q8NDZ9 215 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 TMEM106AQ96A25 262 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 CYYR1Q96J86 154 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 ZNF471Q9BX82 626 aaPredicted RBP2.83□□□□□ -1.96
LSM5-205ENST00000409952 NAT8BQ9UHF3 227 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 EPDR1Q9UM22 224 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 HSPE1-MOB4S4R3N1 261 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 PKD1L2Q7Z442 2459 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 THADAQ6YHU6 1953 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 SOGA1O94964 1423 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 MYO10Q9HD67 2058 aa2.83□□□□□ -1.96
LSM5-205ENST00000409952 IGLV2-18A0A075B6J9 118 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 TRGV10A0A0A0MS01 117 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 C3orf84H3BNL1 204 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 CST7O76096 145 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 TCL1BO95988 128 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 SCTP09683 121 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 CMPK1P30085 196 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 DYNLT3P51808 116 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 SLC38A11Q08AI6 406 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 MORN2Q502X0 79 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 Q6ZS52 159 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 OR8I2Q8N0Y5 310 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 LRRC18Q8N456 261 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 OR2T10Q8NGZ9 312 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 CACYBPQ9HB71 228 aaKnown RBP2.82□□□□□ -1.96
LSM5-205ENST00000409952 POPDC3Q9HBV1 291 aa2.82□□□□□ -1.96
LSM5-205ENST00000409952 RNF11Q9Y3C5 154 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms