RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ETFRF1Q6IPR1 90 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 STXBP6Q8NFX7 210 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 IL22RA2Q969J5 263 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 SCGB3A2Q96PL1 93 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 GPR132Q9UNW8 380 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 KCNIP3Q9Y2W7 256 aa10.81□□□□□ -0.68
CBX3-203ENST00000409747 HELTA6NFD8 242 aa10.8□□□□□ -0.68
CBX3-203ENST00000409747 MLANAQ16655 118 aa10.8□□□□□ -0.68
CBX3-203ENST00000409747 TIGITQ495A1 244 aa10.8□□□□□ -0.68
CBX3-203ENST00000409747 CLVS1Q8IUQ0 354 aaPredicted RBP10.8□□□□□ -0.68
CBX3-203ENST00000409747 FAM24BQ8N5W8 94 aa10.8□□□□□ -0.68
CBX3-203ENST00000409747 C11orf45Q8TAV5 145 aa10.8□□□□□ -0.68
CBX3-203ENST00000409747 Q8WTZ3 238 aa10.8□□□□□ -0.68
CBX3-203ENST00000409747 RSL24D1Q9UHA3 163 aaKnown RBP10.8□□□□□ -0.68
CBX3-203ENST00000409747 SCP2D1Q9UJQ7 156 aa10.8□□□□□ -0.68
CBX3-203ENST00000409747 TMEM56-RWDD3S4R434 201 aa10.8□□□□□ -0.68
CBX3-203ENST00000409747 K7EQG2 157 aa10.79□□□□□ -0.68
CBX3-203ENST00000409747 IGLC1P0CG04 106 aa10.79□□□□□ -0.68
CBX3-203ENST00000409747 SULT1A3P0DMM9 295 aa10.79□□□□□ -0.68
CBX3-203ENST00000409747 SULT1A4P0DMN0 295 aa10.79□□□□□ -0.68
CBX3-203ENST00000409747 SPP1P10451 314 aa10.79□□□□□ -0.68
CBX3-203ENST00000409747 OR10J1P30954 320 aa10.79□□□□□ -0.68
CBX3-203ENST00000409747 RND2P52198 227 aa10.79□□□□□ -0.68
CBX3-203ENST00000409747 AP2S1P53680 142 aaPredicted RBP10.79□□□□□ -0.68
CBX3-203ENST00000409747 YPEL3P61236 119 aaPredicted RBP10.79□□□□□ -0.68
CBX3-203ENST00000409747 RBMS2Q15434 407 aaKnown RBP10.79□□□□□ -0.68
CBX3-203ENST00000409747 PRSS54Q6PEW0 395 aa10.79□□□□□ -0.68
CBX3-203ENST00000409747 MORN3Q6PF18 240 aaPredicted RBP10.79□□□□□ -0.68
CBX3-203ENST00000409747 OR51S1Q8NGJ8 323 aa10.79□□□□□ -0.68
CBX3-203ENST00000409747 GPR146Q96CH1 333 aa10.79□□□□□ -0.68
CBX3-203ENST00000409747 PIGBOS1A0A0B4J2F0 54 aa10.78□□□□□ -0.68
CBX3-203ENST00000409747 ANKRD20A5PA0PJZ0 165 aa10.78□□□□□ -0.68
CBX3-203ENST00000409747 GSTZ1O43708 216 aaPredicted RBP10.78□□□□□ -0.68
CBX3-203ENST00000409747 NOL3O60936 208 aaKnown RBP10.78□□□□□ -0.68
CBX3-203ENST00000409747 IFNA4P05014 189 aa10.78□□□□□ -0.68
CBX3-203ENST00000409747 HNRNPCP07910 306 aaKnown RBP eCLIP10.78□□□□□ -0.689e-6■■■□□ 17.7
CBX3-203ENST00000409747 NPY1RP25929 384 aa10.78□□□□□ -0.68
CBX3-203ENST00000409747 TMBIM6P55061 237 aa10.78□□□□□ -0.68
CBX3-203ENST00000409747 DYNC2LI1Q8TCX1 351 aa10.78□□□□□ -0.68
CBX3-203ENST00000409747 SRPXP78539 464 aa10.78□□□□□ -0.68
CBX3-203ENST00000409747 TRPT1Q86TN4 253 aaKnown RBP10.78□□□□□ -0.68
CBX3-203ENST00000409747 DCANP1Q8TF63 244 aa10.78□□□□□ -0.68
CBX3-203ENST00000409747 FBXL17Q9UF56 701 aa10.78□□□□□ -0.68
CBX3-203ENST00000409747 ZNF688P0C7X2 276 aa10.77□□□□□ -0.69
CBX3-203ENST00000409747 ANXA3P12429 323 aa10.77□□□□□ -0.69
CBX3-203ENST00000409747 NANOS2P60321 138 aaKnown RBP10.77□□□□□ -0.69
CBX3-203ENST00000409747 NMSQ5H8A3 153 aa10.77□□□□□ -0.69
CBX3-203ENST00000409747 MCUBQ9NWR8 336 aa10.77□□□□□ -0.69
CBX3-203ENST00000409747 U3KQ87 197 aa10.77□□□□□ -0.69
CBX3-203ENST00000409747 U3KQE9 123 aa10.77□□□□□ -0.69
CBX3-203ENST00000409747 CCR6P51684 374 aa10.76□□□□□ -0.69
CBX3-203ENST00000409747 TCTAP57738 103 aa10.76□□□□□ -0.69
CBX3-203ENST00000409747 DHRS2Q13268 280 aa10.76□□□□□ -0.69
CBX3-203ENST00000409747 LGALS9CQ6DKI2 356 aa10.76□□□□□ -0.69
CBX3-203ENST00000409747 C16orf54Q6UWD8 224 aa10.76□□□□□ -0.69
CBX3-203ENST00000409747 A0A0B4J2A0 478 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 TOMM40O96008 361 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 IFNA10P01566 189 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 IL4P05112 153 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 NUP62P37198 522 aaPredicted RBP10.75□□□□□ -0.69
CBX3-203ENST00000409747 SMCO1Q147U7 214 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 GLMPQ8WWB7 406 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 HRH4Q9H3N8 390 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 SHPKQ9UHJ6 478 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 NXPH3O95157 252 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 RD3LP0DJH9 198 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 MIFP14174 115 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 FAUP35544 74 aaKnown RBP10.75□□□□□ -0.69
CBX3-203ENST00000409747 ATP5IP56385 69 aaPredicted RBP10.75□□□□□ -0.69
CBX3-203ENST00000409747 SNRPD3P62318 126 aaKnown RBP10.75□□□□□ -0.69
CBX3-203ENST00000409747 ACTL10Q5JWF8 245 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 DTD1Q8TEA8 209 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 C2CD4CQ8TF44 421 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 TMEM170AQ8WVE7 144 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 NPIPB3Q92617 1050 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 ACY3Q96HD9 319 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 SEPSECSQ9HD40 501 aaKnown RBP10.75□□□□□ -0.69
CBX3-203ENST00000409747 HSPB7Q9UBY9 170 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 PFDN2Q9UHV9 154 aa10.75□□□□□ -0.69
CBX3-203ENST00000409747 KMT2AQ03164 3969 aa10.74□□□□□ -0.69
CBX3-203ENST00000409747 FABP12A6NFH5 140 aa10.74□□□□□ -0.69
CBX3-203ENST00000409747 KNCNA6PVL3 124 aa10.74□□□□□ -0.69
CBX3-203ENST00000409747 C11orf94C9JXX5 98 aa10.74□□□□□ -0.69
CBX3-203ENST00000409747 AKR1C4P17516 323 aa10.74□□□□□ -0.69
CBX3-203ENST00000409747 USF2Q15853 346 aaPredicted RBP10.74□□□□□ -0.69
CBX3-203ENST00000409747 PSMG4Q5JS54 123 aa10.74□□□□□ -0.69
CBX3-203ENST00000409747 LGI3Q8N145 548 aa10.74□□□□□ -0.69
CBX3-203ENST00000409747 CENPSQ8N2Z9 138 aa10.74□□□□□ -0.69
CBX3-203ENST00000409747 Q8NAQ8 132 aa10.74□□□□□ -0.69
CBX3-203ENST00000409747 DEFB4AO15263 64 aa10.73□□□□□ -0.69
CBX3-203ENST00000409747 NUTF2P61970 127 aaKnown RBP10.73□□□□□ -0.69
CBX3-203ENST00000409747 SLIRPQ9GZT3 109 aaKnown RBP10.73□□□□□ -0.69
CBX3-203ENST00000409747 NRN1Q9NPD7 142 aa10.73□□□□□ -0.69
CBX3-203ENST00000409747 DUXBA0A1W2PPF3 345 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 ZNF705EA8MWA4 302 aaPredicted RBP10.72□□□□□ -0.69
CBX3-203ENST00000409747 BUB3O43684 328 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 GIG44P09565 113 aaPredicted RBP10.72□□□□□ -0.69
CBX3-203ENST00000409747 AP3S2P59780 193 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 SIGLEC15Q6ZMC9 328 aa10.72□□□□□ -0.69
CBX3-203ENST00000409747 OR51G1Q8NGK1 321 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms