RNA–Protein interactions for RNA: ENST00000409551.7

PAX3-207, Transcript of paired box 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-207ENST00000409551 NIPBLQ6KC79 2804 aaeCLIP13.18□□□□□ -0.3
PAX3-207ENST00000409551 I3L2K1 104 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 ARL14EPLP0DKL9 152 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 GATA2P23769 480 aaPredicted RBP13.17□□□□□ -0.3
PAX3-207ENST00000409551 LOXL1Q08397 574 aaPredicted RBP13.17□□□□□ -0.3
PAX3-207ENST00000409551 FAM78BQ5VT40 261 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 IQCF2Q8IXL9 164 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 TTC9CQ8N5M4 171 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 GATAD1Q8WUU5 269 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 RASL11BQ9BPW5 248 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 MRPL32Q9BYC8 188 aaKnown RBP13.17□□□□□ -0.3
PAX3-207ENST00000409551 IGHV7-81A0A0B4J1V7 117 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 PSMB11A5LHX3 300 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 FOSL1P15407 271 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 CD81P60033 236 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 NDPQ00604 133 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 ASPHD1Q5U4P2 390 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 SPATA31B1PQ5VZV4 182 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 OR1L4Q8NGR5 311 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 PFDN5Q99471 154 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 TXNDC17Q9BRA2 123 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 FAM103A1Q9BTL3 118 aaKnown RBP13.17□□□□□ -0.3
PAX3-207ENST00000409551 TNFRSF19Q9NS68 423 aa13.17□□□□□ -0.3
PAX3-207ENST00000409551 SVEP1Q4LDE5 3571 aa13.16□□□□□ -0.3
PAX3-207ENST00000409551 IGHV3OR16-10A0A075B7F0 116 aa13.16□□□□□ -0.3
PAX3-207ENST00000409551 TMEM250H0YL14 139 aa13.16□□□□□ -0.3
PAX3-207ENST00000409551 IGHV3-48P01763 117 aa13.16□□□□□ -0.3
PAX3-207ENST00000409551 IGHV4-38-2P0DP08 117 aa13.16□□□□□ -0.3
PAX3-207ENST00000409551 FAM90A2PQ658T7 463 aa13.16□□□□□ -0.3
PAX3-207ENST00000409551 OR4X1Q8NH49 305 aa13.16□□□□□ -0.3
PAX3-207ENST00000409551 SUN5Q8TC36 379 aa13.16□□□□□ -0.3
PAX3-207ENST00000409551 TECRQ9NZ01 308 aaKnown RBP13.16□□□□□ -0.3
PAX3-207ENST00000409551 SONP18583 2426 aaKnown RBP13.16□□□□□ -0.3
PAX3-207ENST00000409551 CR1P17927 2039 aa13.16□□□□□ -0.3
PAX3-207ENST00000409551 PAGE4O60829 102 aa13.15□□□□□ -0.3
PAX3-207ENST00000409551 GCHFRP30047 84 aa13.15□□□□□ -0.3
PAX3-207ENST00000409551 TAS2R45P59539 299 aa13.15□□□□□ -0.3
PAX3-207ENST00000409551 BRD3OSQ6XYD6 125 aa13.15□□□□□ -0.3
PAX3-207ENST00000409551 MIR17HGQ75NE6 70 aa13.15□□□□□ -0.3
PAX3-207ENST00000409551 DNAJC4Q9NNZ3 241 aa13.15□□□□□ -0.3
PAX3-207ENST00000409551 A0A0U1RQK1 487 aa13.15□□□□□ -0.31
PAX3-207ENST00000409551 FAM74A7A6NL05 159 aa13.15□□□□□ -0.31
PAX3-207ENST00000409551 J3QLI3 93 aa13.15□□□□□ -0.31
PAX3-207ENST00000409551 K7EIM0 57 aa13.15□□□□□ -0.31
PAX3-207ENST00000409551 CEBPGP53567 150 aa13.15□□□□□ -0.31
PAX3-207ENST00000409551 BPIFB3P59826 476 aa13.15□□□□□ -0.31
PAX3-207ENST00000409551 ZNF90Q03938 601 aa13.15□□□□□ -0.31
PAX3-207ENST00000409551 FAM74A3Q4VXF1 159 aa13.15□□□□□ -0.31
PAX3-207ENST00000409551 AWAT1Q58HT5 328 aa13.15□□□□□ -0.31
PAX3-207ENST00000409551 TMEM37Q8WXS4 190 aa13.15□□□□□ -0.31
PAX3-207ENST00000409551 HIVEP2P31629 2446 aa13.14□□□□□ -0.31
PAX3-207ENST00000409551 IGLV11-55A0A075B6I3 123 aa13.14□□□□□ -0.31
PAX3-207ENST00000409551 H3BQ15 152 aa13.14□□□□□ -0.31
PAX3-207ENST00000409551 LY6G6DO95868 133 aa13.14□□□□□ -0.31
PAX3-207ENST00000409551 EGR2P11161 476 aaPredicted RBP13.14□□□□□ -0.31
PAX3-207ENST00000409551 RHEBQ15382 184 aa13.14□□□□□ -0.31
PAX3-207ENST00000409551 PQLC2Q6ZP29 291 aa13.14□□□□□ -0.31
PAX3-207ENST00000409551 PIFOQ8TCI5 191 aa13.14□□□□□ -0.31
PAX3-207ENST00000409551 RBM14Q96PK6 669 aaKnown RBP13.14□□□□□ -0.31
PAX3-207ENST00000409551 NIPSNAP3BQ9BS92 247 aa13.14□□□□□ -0.31
PAX3-207ENST00000409551 PUS1Q9Y606 427 aaKnown RBP eCLIP13.14□□□□□ -0.31
PAX3-207ENST00000409551 ARL2-SNX15V9GYD0 113 aa13.14□□□□□ -0.31
PAX3-207ENST00000409551 M0R036 132 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 COX7A2P2O60397 106 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 CLN5O75503 358 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 C8orf88P0DMB2 117 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 KLF17Q5JT82 389 aaPredicted RBP13.13□□□□□ -0.31
PAX3-207ENST00000409551 C5orf56Q8N8D9 126 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.13□□□□□ -0.31
PAX3-207ENST00000409551 OR4F5Q8NH21 305 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 SGMS2Q8NHU3 365 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 TVP23CQ96ET8 276 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 FANCD2OSQ96PS1 177 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 OR4F4Q96R69 305 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 TMEM167BQ9NRX6 74 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 MOB4Q9Y3A3 225 aa13.13□□□□□ -0.31
PAX3-207ENST00000409551 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.13□□□□□ -0.31
PAX3-207ENST00000409551 ELOA3CA0A087WX78 387 aaPredicted RBP13.12□□□□□ -0.31
PAX3-207ENST00000409551 IGHV3-21A0A0B4J1V1 117 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 C7orf77A4D0Y5 90 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 C11orf94C9JXX5 98 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 IGLC1P0CG04 106 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 PLP1P60201 277 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 KLK9Q2XQG4 91 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 C10orf113Q5VZT2 155 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 TMEM68Q96MH6 324 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 ZNF48Q96MX3 618 aaPredicted RBP13.12□□□□□ -0.31
PAX3-207ENST00000409551 HSPB9Q9BQS6 159 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 KLK9Q9UKQ9 250 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 NSD1Q96L73 2696 aaPredicted RBP13.12□□□□□ -0.31
PAX3-207ENST00000409551 F6UZH7 168 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 PDE6DO43924 150 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 PATE2Q6UY27 113 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 FAM110DQ8TAY7 271 aaPredicted RBP13.12□□□□□ -0.31
PAX3-207ENST00000409551 RPS10P5Q9NQ39 176 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 THYN1Q9P016 225 aa13.12□□□□□ -0.31
PAX3-207ENST00000409551 AVPP01185 164 aa13.11□□□□□ -0.31
PAX3-207ENST00000409551 FABP1P07148 127 aa13.11□□□□□ -0.31
PAX3-207ENST00000409551 HIST1H1BP16401 226 aaKnown RBP13.11□□□□□ -0.31
PAX3-207ENST00000409551 PNRC1Q12796 327 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms