RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 IGKV1-33P01594 117 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 DLK1P80370 383 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 CT45A1Q5HYN5 189 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 TPTE2P1Q5T6R2 138 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 RPP25LQ8N5L8 163 aaKnown RBP9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 ZNF709Q8N972 641 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 OR10A7Q8NGE5 316 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 CT45A3Q8NHU0 189 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 RAX2Q96IS3 184 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 NPCDR1Q9BY65 106 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 WDR83OSQ9Y284 106 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 ZFP92A6NM28 416 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 LINC01548A6NM66 108 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 BUB1B-PAK6H3BSN5 160 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 MPDU1O75352 247 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 IFNA17P01571 189 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 CEBPGP53567 150 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 FGF8P55075 233 aaPredicted RBP9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 OR2B8PP59922 312 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 RAB11AP62491 216 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 POU2AF1Q16633 256 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 FFAR4Q5NUL3 377 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 FAM24BQ8N5W8 94 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 OR10G9Q8NGN4 311 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 OR10G7Q8NGN6 311 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 MANBALQ9NQG1 85 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 TMEM140Q9NV12 185 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 SAA2-SAA4A0A096LPE2 208 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 SAA2P0DJI9 122 aaPredicted RBP9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 HLA-DRB5Q30154 266 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 DEFB136Q30KP8 78 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 ACOT6Q3I5F7 207 aaPredicted RBP9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 SPINK9Q5DT21 86 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 HEPN1Q6WQI6 88 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 LCNL1Q6ZST4 164 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 ZFP82Q8N141 532 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 ZNF596Q8TC21 504 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 FOXA2Q9Y261 457 aaPredicted RBP9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 MOB4Q9Y3A3 225 aa9.91□□□□□ -0.82
CHRNA1-205ENST00000409542 C15orf61A6NNL5 157 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 SEC14L6B5MCN3 397 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 PRSS46E5RG02 174 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 TMEM250H0YL14 139 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 CCL24O00175 119 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 CD1BP29016 333 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 DIAPH2-AS1Q14236 149 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 SLC25A48Q6ZT89 311 aaKnown RBP9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 C5orf56Q8N8D9 126 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 ZNF383Q8NA42 475 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 C2CD4CQ8TF44 421 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 HEYLQ9NQ87 328 aaPredicted RBP9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 TMEM242Q9NWH2 141 aa9.9□□□□□ -0.83
CHRNA1-205ENST00000409542 HYDINQ4G0P3 5121 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 M0QZK8 103 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 CYB5BO43169 146 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 HRASP01112 189 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 IFNA10P01566 189 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 IGHV3-7P01780 117 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 PSMB3P49720 205 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 MEF2BQ02080 365 aaPredicted RBP9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 HNF4GQ14541 408 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 SSX9Q7RTT3 188 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 SLC25A22Q9H936 323 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 SDF2L1Q9HCN8 221 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 TMEM14BQ9NUH8 114 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 CSMD3Q7Z407 3707 aa9.89□□□□□ -0.83
CHRNA1-205ENST00000409542 TRAV3A0A0B4J244 114 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 C5orf52A6NGY3 159 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 UBE2CO00762 179 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 RPLP1P05386 114 aaKnown RBP9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 IL6RP08887 468 aaPredicted RBP9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 OPRK1P41145 380 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 RND2P52198 227 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 CD81P60033 236 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 HSPE1P61604 102 aaKnown RBP9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 LEAP2Q969E1 77 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 RAB24Q969Q5 203 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 GAL3ST2Q9H3Q3 398 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 KCNIP2Q9NS61 270 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 METTL1Q9UBP6 276 aaKnown RBP9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 ZMAT5Q9UDW3 170 aaKnown RBP9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 PRNDQ9UKY0 176 aa9.88□□□□□ -0.83
CHRNA1-205ENST00000409542 A0A087X0M5 115 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 A0A1B0GX30 115 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 A0A1W2PPI3 338 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 SMCO3A2RU48 225 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 ZNF727A8MUV8 499 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 KBTBD11O94819 623 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 S100A6P06703 90 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 FAM106CPP0CH98 169 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 CEACAM3P40198 252 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 RPL35P42766 123 aaKnown RBP9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 CDC34P49427 236 aaPredicted RBP9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 AKR1D1P51857 326 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 RPS16P62249 146 aaKnown RBP9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 ELOBQ15370 118 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 OR4A47Q6IF82 309 aa9.87□□□□□ -0.83
CHRNA1-205ENST00000409542 CYP2G1PQ6ZSU1 146 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms