RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ZNF137PP52743 207 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 MAJINQ3KP22 176 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 C2orf83Q53S99 150 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 TPTE2P1Q5T6R2 138 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 RUSC1-AS1Q66K80 236 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 PDPNQ86YL7 162 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 OR4B1Q8NGF8 309 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 OR1L6Q8NGR2 347 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 OR2T6Q8NHC8 308 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 CMTM2Q8TAZ6 248 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 TMEM167AQ8TBQ9 72 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 WASHC3Q9Y3C0 194 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 SCO2A0A1W2PP80 73 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 CBY3A6NI87 242 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 COX7A1P24310 79 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 VPS25Q9BRG1 176 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 MRPL36Q9P0J6 103 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 SLC45A2Q9UMX9 530 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 ENSAO43768 121 aaKnown RBP12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 GCHFRP30047 84 aa12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 C8orf31Q8N9H6 132 aa12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 ZNF738Q8NE65 137 aa12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 FNDC4Q9H6D8 234 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 CXorf1O96002 111 aa12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 USF1P22415 310 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 PPOXP50336 477 aa12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 FAM78BQ5VT40 261 aa12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 OR4P4Q8NGL7 312 aa12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 OR1L8Q8NGR8 309 aa12.22□□□□□ -0.45
SCAMP4-202ENST00000409472 A0A1W2PPI3 338 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 A0A1W2PPR1 153 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 NDUFB8O95169 186 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 IGLV1-47P01700 117 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 CD69Q07108 199 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 TMEM249Q2WGJ8 235 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 LDLRAD2Q5SZI1 272 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 MORN5Q5VZ52 161 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 FAM71F2Q6NXP2 309 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 TMEM144Q7Z5S9 345 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 LINC01551Q86U37 167 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 OR4C5Q8NGB2 326 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 PKD1L2Q7Z442 2459 aa12.21□□□□□ -0.45
SCAMP4-202ENST00000409472 C22orf46C9J442 243 aa12.21□□□□□ -0.46
SCAMP4-202ENST00000409472 HLA-DRB5Q30154 266 aa12.21□□□□□ -0.46
SCAMP4-202ENST00000409472 ZNF503Q96F45 646 aa12.21□□□□□ -0.46
SCAMP4-202ENST00000409472 KCNIP2Q9NS61 270 aa12.21□□□□□ -0.46
SCAMP4-202ENST00000409472 TRAPPC1Q9Y5R8 145 aa12.21□□□□□ -0.46
SCAMP4-202ENST00000409472 AKAP6Q13023 2319 aa12.21□□□□□ -0.46
SCAMP4-202ENST00000409472 VPS13CQ709C8 3753 aa12.2□□□□□ -0.46
SCAMP4-202ENST00000409472 CFAP46Q8IYW2 2715 aa12.2□□□□□ -0.46
SCAMP4-202ENST00000409472 RHOBP62745 196 aa12.2□□□□□ -0.46
SCAMP4-202ENST00000409472 MMDQ15546 238 aa12.2□□□□□ -0.46
SCAMP4-202ENST00000409472 TMEM256Q8N2U0 113 aa12.2□□□□□ -0.46
SCAMP4-202ENST00000409472 UQCR10Q9UDW1 63 aa12.2□□□□□ -0.46
SCAMP4-202ENST00000409472 PPIAL4CA0A0B4J2A2 164 aa12.2□□□□□ -0.46
SCAMP4-202ENST00000409472 PPIAL4GP0DN37 164 aa12.2□□□□□ -0.46
SCAMP4-202ENST00000409472 STPG4Q8N801 248 aa12.2□□□□□ -0.46
SCAMP4-202ENST00000409472 LOC105371242A0A075B767 164 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 RAB31Q13636 194 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 TDRG1Q3Y452 100 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 LAMTOR2Q9Y2Q5 125 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 COX11Q9Y6N1 276 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 CACNA1AO00555 2505 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 MED13LQ71F56 2210 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 FNDC10F2Z333 226 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 PDE6DO43924 150 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 AREGP15514 252 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 MFAP2P55001 183 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 RPL19P84098 196 aaKnown RBP12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 Q6ZWC4 215 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 VN1R17PQ8TDU5 208 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 ABCA1O95477 2261 aa12.19□□□□□ -0.46
SCAMP4-202ENST00000409472 OR10J4P0C629 311 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 HNRNPA3P51991 378 aaKnown RBP12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 HCP5Q6MZN7 132 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 CSTL1Q9H114 145 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 ONECUT1Q9UBC0 465 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 TRAV5A0A0B4J249 113 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 IGHV1-3A0A0C4DH29 117 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 IGHV2-70DA0A0C4DH43 119 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 IGLC7A0M8Q6 106 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 BUB1B-PAK6H3BSN5 160 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 RPL15P61313 204 aaKnown RBP12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 ERHP84090 104 aaKnown RBP12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 ZNF90Q03938 601 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 PSG5Q15238 335 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 FBLN7Q53RD9 439 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 PNKDQ8N490 385 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 VSTM2AQ8TAG5 236 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 TXN2Q99757 166 aa12.18□□□□□ -0.46
SCAMP4-202ENST00000409472 IGHV3-21A0A0B4J1V1 117 aa12.17□□□□□ -0.46
SCAMP4-202ENST00000409472 TMEM238C9JI98 176 aa12.17□□□□□ -0.46
SCAMP4-202ENST00000409472 F6UZH7 168 aa12.17□□□□□ -0.46
SCAMP4-202ENST00000409472 VMA21Q3ZAQ7 101 aa12.17□□□□□ -0.46
SCAMP4-202ENST00000409472 C11orf71Q6IPW1 123 aa12.17□□□□□ -0.46
SCAMP4-202ENST00000409472 OR5AU1Q8NGC0 362 aa12.17□□□□□ -0.46
SCAMP4-202ENST00000409472 OR4A5Q8NH83 315 aa12.17□□□□□ -0.46
SCAMP4-202ENST00000409472 CLEC7AQ9BXN2 247 aa12.17□□□□□ -0.46
SCAMP4-202ENST00000409472 IGKV1D-37A0A075B6S9 117 aa12.16□□□□□ -0.46
SCAMP4-202ENST00000409472 RPS20P60866 119 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms