RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 IGKV1-17P01599 117 aa13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 NPIPB3Q92617 1050 aa13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 ACY3Q96HD9 319 aa13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 CIB3Q96Q77 187 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 RNF2Q99496 336 aa13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 SPAG8Q99932 426 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 PAIP2BQ9ULR5 123 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-206ENST00000409141 MPTX1A8MV57 137 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 WRBO00258 174 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 IGLC1P0CG04 106 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 OR10J1P30954 320 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 RAB11AP62491 216 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 MZT2BQ6NZ67 158 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 OR1S2Q8NGQ3 325 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 MITD1Q8WV92 249 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 WFDC10AQ9H1F0 79 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 ZFAND3Q9H8U3 227 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 NUDT15Q9NV35 164 aa13.44□□□□□ -0.26
PDLIM2-206ENST00000409141 FAM240BA0A1B0GVZ2 78 aa13.43□□□□□ -0.26
PDLIM2-206ENST00000409141 BMI1P35226 326 aa13.43□□□□□ -0.26
PDLIM2-206ENST00000409141 RPP30P78346 268 aaKnown RBP13.43□□□□□ -0.26
PDLIM2-206ENST00000409141 Q8WTZ3 238 aa13.43□□□□□ -0.26
PDLIM2-206ENST00000409141 ZMAT4Q9H898 229 aa13.43□□□□□ -0.26
PDLIM2-206ENST00000409141 SRD5A3Q9H8P0 318 aa13.43□□□□□ -0.26
PDLIM2-206ENST00000409141 TBC1D24Q9ULP9 559 aa13.43□□□□□ -0.26
PDLIM2-206ENST00000409141 H2AFB2P0C5Z0 115 aa13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 NPPCP23582 126 aa13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 GPX4P36969 197 aaPredicted RBP13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 YPEL3P61236 119 aaPredicted RBP13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 ID3Q02535 119 aa13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 ASAH1Q13510 395 aa13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 OR4C46A6NHA9 309 aa13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 UPK1BO75841 260 aa13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 APOHP02749 345 aaPredicted RBP13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 HAGHQ16775 308 aa13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 ST8SIA2Q92186 375 aa13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 METTL26Q96S19 204 aa13.42□□□□□ -0.26
PDLIM2-206ENST00000409141 IGHV3-66A0A0C4DH42 116 aa13.41□□□□□ -0.26
PDLIM2-206ENST00000409141 NKX2-1P43699 371 aaPredicted RBP13.41□□□□□ -0.26
PDLIM2-206ENST00000409141 GAMTQ14353 236 aa13.41□□□□□ -0.26
PDLIM2-206ENST00000409141 IAH1Q2TAA2 248 aaPredicted RBP13.41□□□□□ -0.26
PDLIM2-206ENST00000409141 OR4D5Q8NGN0 318 aa13.41□□□□□ -0.26
PDLIM2-206ENST00000409141 SLC35E1Q96K37 410 aa13.41□□□□□ -0.26
PDLIM2-206ENST00000409141 VSIRQ9H7M9 311 aa13.41□□□□□ -0.26
PDLIM2-206ENST00000409141 GSKIPQ9P0R6 139 aa13.41□□□□□ -0.26
PDLIM2-206ENST00000409141 IGKV3-7A0A075B6H7 116 aa13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 CD5P06127 495 aa13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 POLR2GP62487 172 aaKnown RBP eCLIP13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 SPANXN5Q5MJ07 72 aa13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 TCF24Q7RTU0 167 aa13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 LILRB2Q8N423 598 aa13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 ZNF431Q8TF32 576 aaPredicted RBP13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 RCHY1Q96PM5 261 aa13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 SEC22CQ9BRL7 303 aa13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 TM2D3Q9BRN9 247 aa13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 TMEM231Q9H6L2 316 aa13.4□□□□□ -0.26
PDLIM2-206ENST00000409141 A0A1W2PS18 150 aa13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 RBMY1BA6NDE4 496 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 RBMY1EA6NEQ0 496 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 DFFBO76075 338 aa13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 RBMY1DP0C7P1 496 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 RD3LP0DJH9 198 aa13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 CRYBB3P26998 211 aa13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 TFPI2P48307 235 aa13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 FAM90A2PQ658T7 463 aa13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 LINC00322Q6ZN03 302 aaPredicted RBP13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 NARS2Q96I59 477 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 WWC2-AS2Q96NR7 200 aa13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 UBQLN2Q9UHD9 624 aa13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 STRAPQ9Y3F4 350 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-206ENST00000409141 STAB2Q8WWQ8 2551 aa13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 ZFP92A6NM28 416 aa13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 H3BP45 60 aa13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 SCGB1D2O95969 90 aa13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 RPL11P62913 178 aaKnown RBP13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 PAFAH1B2P68402 229 aa13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 GBGT1Q8N5D6 347 aa13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 C12orf45Q8N5I9 185 aaPredicted RBP13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 ZBTB8BQ8NAP8 495 aaPredicted RBP13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 ENKURQ8TC29 256 aa13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 PSENENQ9NZ42 101 aa13.38□□□□□ -0.27
PDLIM2-206ENST00000409141 CCSO14618 274 aa13.37□□□□□ -0.27
PDLIM2-206ENST00000409141 SSSCA1O60232 199 aa13.37□□□□□ -0.27
PDLIM2-206ENST00000409141 TOMM40O96008 361 aa13.37□□□□□ -0.27
PDLIM2-206ENST00000409141 IL4P05112 153 aa13.37□□□□□ -0.27
PDLIM2-206ENST00000409141 IFITM3Q01628 133 aa13.37□□□□□ -0.27
PDLIM2-206ENST00000409141 SPATA25Q9BR10 227 aa13.37□□□□□ -0.27
PDLIM2-206ENST00000409141 FAM25EA8MYX2 175 aa13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 PSG1P11464 419 aa13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 ODF3L2Q3SX64 289 aa13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 WFDC3Q8IUB2 231 aa13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 GRAMD2BQ96HH9 432 aa13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 SMIM8Q96KF7 97 aa13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 DNASE2O00115 360 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 HNRNPCP07910 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 P2RY1P47900 373 aa13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 CMC4P56277 68 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 USF2Q15853 346 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 OR51G1Q8NGK1 321 aa13.36□□□□□ -0.27
PDLIM2-206ENST00000409141 CITED4Q96RK1 184 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms