RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 SMIM9A6NGZ8 99 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 BUB3O43684 328 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 TMEM127O75204 238 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 HNRNPCP07910 306 aaKnown RBP eCLIP9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 FXYD7P58549 80 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 RND3P61587 244 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 NUTF2P61970 127 aaKnown RBP9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 OXA1LQ15070 435 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 LPCAT3Q6P1A2 487 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 PRSS54Q6PEW0 395 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 Q8N1X5 172 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 TMEM170AQ8WVE7 144 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 NIPSNAP3BQ9BS92 247 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 NRN1Q9NPD7 142 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 RAB26Q9ULW5 256 aa9.24□□□□□ -0.93
TUBA3D-202ENST00000409047 PI3P19957 117 aa9.23□□□□□ -0.93
TUBA3D-202ENST00000409047 PRSS3P35030 304 aa9.23□□□□□ -0.93
TUBA3D-202ENST00000409047 NKX2-1P43699 371 aaPredicted RBP9.23□□□□□ -0.93
TUBA3D-202ENST00000409047 AP2S1P53680 142 aaPredicted RBP9.23□□□□□ -0.93
TUBA3D-202ENST00000409047 YPEL3P61236 119 aaPredicted RBP9.23□□□□□ -0.93
TUBA3D-202ENST00000409047 DHODHQ02127 395 aa9.23□□□□□ -0.93
TUBA3D-202ENST00000409047 AARDQ4LEZ3 155 aa9.23□□□□□ -0.93
TUBA3D-202ENST00000409047 TMEM88Q6PEY1 159 aa9.23□□□□□ -0.93
TUBA3D-202ENST00000409047 C1orf158Q8N1D5 194 aa9.23□□□□□ -0.93
TUBA3D-202ENST00000409047 RFNGQ9Y644 331 aa9.23□□□□□ -0.93
TUBA3D-202ENST00000409047 TRAV30A0A087WSZ9 112 aa9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 S100GP29377 79 aa9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 RPS19P39019 145 aaKnown RBP9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 HOXA1P49639 335 aaPredicted RBP9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 EIF2B2P49770 351 aaKnown RBP9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 RND2P52198 227 aa9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 SUB1P53999 127 aaKnown RBP eCLIP9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 TSPAN5P62079 268 aa9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 SNRPD3P62318 126 aaKnown RBP9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 GSG1LQ6UXU4 331 aa9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 LHFPL1Q86WI0 220 aa9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 SAMD12Q8N8I0 201 aa9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 OR1S2Q8NGQ3 325 aa9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 NARS2Q96I59 477 aaKnown RBP9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 CLUHP3Q96NS8 147 aa9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 WDR12Q9GZL7 423 aaKnown RBP9.22□□□□□ -0.93
TUBA3D-202ENST00000409047 IGHV3OR16-12A0A075B7B8 117 aa9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 SOCS3O14543 225 aa9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 IGKV3-20P01619 116 aa9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 IL4P05112 153 aa9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 HTN3P15516 51 aa9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 OR10J1P30954 320 aa9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 SIGLEC15Q6ZMC9 328 aa9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 ZNRF2Q8NHG8 242 aa9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 SLC35B3Q9H1N7 401 aa9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 SAV1Q9H4B6 383 aaPredicted RBP9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 YTHDF2Q9Y5A9 579 aaKnown RBP9.21□□□□□ -0.94
TUBA3D-202ENST00000409047 M0QYG6 137 aa9.2□□□□□ -0.94
TUBA3D-202ENST00000409047 AKR1C2P52895 323 aa9.2□□□□□ -0.94
TUBA3D-202ENST00000409047 PIGPP57054 158 aa9.2□□□□□ -0.94
TUBA3D-202ENST00000409047 FAM3BP58499 235 aaPredicted RBP9.2□□□□□ -0.94
TUBA3D-202ENST00000409047 ZNF79Q15937 498 aa9.2□□□□□ -0.94
TUBA3D-202ENST00000409047 SP6Q3SY56 376 aa9.2□□□□□ -0.94
TUBA3D-202ENST00000409047 Q8WTZ3 238 aa9.2□□□□□ -0.94
TUBA3D-202ENST00000409047 YTHDF1Q9BYJ9 559 aaKnown RBP9.2□□□□□ -0.94
TUBA3D-202ENST00000409047 VCX3BQ9H321 246 aa9.2□□□□□ -0.94
TUBA3D-202ENST00000409047 NBDYA0A0U1RRE5 68 aa9.19□□□□□ -0.94
TUBA3D-202ENST00000409047 TEX48A0A1B0GUV7 120 aa9.19□□□□□ -0.94
TUBA3D-202ENST00000409047 TOMM40O96008 361 aa9.19□□□□□ -0.94
TUBA3D-202ENST00000409047 UCP1P25874 307 aa9.19□□□□□ -0.94
TUBA3D-202ENST00000409047 C2orf83Q53S99 150 aa9.19□□□□□ -0.94
TUBA3D-202ENST00000409047 FOXI2Q6ZQN5 318 aa9.19□□□□□ -0.94
TUBA3D-202ENST00000409047 CROCCP3Q8IVE0 287 aa9.19□□□□□ -0.94
TUBA3D-202ENST00000409047 C6orf223Q8N319 242 aa9.19□□□□□ -0.94
TUBA3D-202ENST00000409047 ZNF486Q96H40 463 aaPredicted RBP9.19□□□□□ -0.94
TUBA3D-202ENST00000409047 SCRT2Q9NQ03 307 aa9.19□□□□□ -0.94
TUBA3D-202ENST00000409047 C3orf85A0A1B0GTC6 90 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 LOC102723971A0A1B0GUV8 181 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 RPS10-NUDT3A0A1W2PQS6 291 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 F6UB75 175 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 SCGB2A1O75556 95 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 MYCBP2O75592 4640 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 PRM2P04554 102 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 PSG1P11464 419 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 SLC25A4P12235 298 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 ELK1P19419 428 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 RCVRNP35243 200 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 HTR2BP41595 481 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 SPCS3P61009 180 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 NEDD8Q15843 81 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 OR51G1Q8NGK1 321 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 OR52E5Q8NH55 327 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 LHFPL5Q8TAF8 219 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 NPIPB3Q92617 1050 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 PDCD10Q9BUL8 212 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 SCPEP1Q9HB40 452 aa9.18□□□□□ -0.94
TUBA3D-202ENST00000409047 A8MTW9 85 aa9.17□□□□□ -0.94
TUBA3D-202ENST00000409047 PGAM2P15259 253 aa9.17□□□□□ -0.94
TUBA3D-202ENST00000409047 PAX9P55771 341 aa9.17□□□□□ -0.94
TUBA3D-202ENST00000409047 SNX29P2Q8IUI4 249 aa9.17□□□□□ -0.94
TUBA3D-202ENST00000409047 C15orf53Q8NAA6 179 aa9.17□□□□□ -0.94
TUBA3D-202ENST00000409047 RNASEH2CQ8TDP1 164 aaKnown RBP9.17□□□□□ -0.94
TUBA3D-202ENST00000409047 C17orf77Q96MU5 243 aa9.17□□□□□ -0.94
TUBA3D-202ENST00000409047 ENY2Q9NPA8 101 aa9.17□□□□□ -0.94
TUBA3D-202ENST00000409047 KLK11Q9UBX7 282 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms