RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 ZNF846Q147U1 533 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 TSNQ15631 228 aaKnown RBP1.52□□□□□ -2.17
PTPN12-202ENST00000407343 IAH1Q2TAA2 248 aaPredicted RBP1.52□□□□□ -2.17
PTPN12-202ENST00000407343 MCFD2Q8NI22 146 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 MRPL30Q8TCC3 161 aaKnown RBP1.52□□□□□ -2.17
PTPN12-202ENST00000407343 ZHX1-C8orf76Q96EF9 292 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 RNASE7Q9H1E1 156 aaKnown RBP1.52□□□□□ -2.17
PTPN12-202ENST00000407343 C14orf105Q9NVL8 296 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 TMEM56-RWDD3S4R434 201 aa1.52□□□□□ -2.17
PTPN12-202ENST00000407343 DIDO1Q9BTC0 2240 aaKnown RBP1.51□□□□□ -2.17
PTPN12-202ENST00000407343 IGKV3-7A0A075B6H7 116 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 IGKV2-40A0A087WW87 121 aaPredicted RBP1.51□□□□□ -2.17
PTPN12-202ENST00000407343 hADV38S2A0JD32 116 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 TSTD3H0UI37 97 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 SDCBPO00560 298 aaPredicted RBP1.51□□□□□ -2.17
PTPN12-202ENST00000407343 PDE6DO43924 150 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 MFSD11O43934 449 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 IGKV2D-40P01614 121 aaPredicted RBP1.51□□□□□ -2.17
PTPN12-202ENST00000407343 C1QBP02746 253 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 SCGB1A1P11684 91 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 IDO1P14902 403 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 HSPE1P61604 102 aaKnown RBP1.51□□□□□ -2.17
PTPN12-202ENST00000407343 NDUFA5Q16718 116 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 GRINAQ7Z429 371 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 OOSP2Q86WS3 158 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 C20orf196Q8IYI0 205 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 STX19Q8N4C7 294 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 OR13C6PQ8NH95 151 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 PFN4Q8NHR9 129 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 MAFIPQ8WZ33 124 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 C11orf40Q8WZ69 217 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 ULBP3Q9BZM4 244 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 HECW2Q9P2P5 1572 aa1.51□□□□□ -2.17
PTPN12-202ENST00000407343 ARHGEF10O15013 1369 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 ROBO3Q96MS0 1386 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 TRAV26-2A0A0B4J265 109 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 PRORSD1PA6NEY8 169 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 METTL15P1P0C7V9 234 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 TCTAP57738 103 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 RPS20P60866 119 aaKnown RBP1.5□□□□□ -2.17
PTPN12-202ENST00000407343 SNRPD2P62316 118 aaKnown RBP1.5□□□□□ -2.17
PTPN12-202ENST00000407343 RHOBP62745 196 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 PSPHP78330 225 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 SMCO1Q147U7 214 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 SURF2Q15527 256 aaPredicted RBP1.5□□□□□ -2.17
PTPN12-202ENST00000407343 C10orf55Q5SWW7 151 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 TMEM78Q5T7P6 136 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 LCN15Q6UWW0 184 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 BORCS5Q969J3 196 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 YIPF3Q9GZM5 350 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 UQCC1Q9NVA1 299 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 PYCARDQ9ULZ3 195 aa1.5□□□□□ -2.17
PTPN12-202ENST00000407343 TMEM212A6NML5 194 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 KPNA4O00629 521 aaPredicted RBP1.49□□□□□ -2.17
PTPN12-202ENST00000407343 HCRTO43612 131 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 UBBP0CG47 229 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 S100GP29377 79 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 EIF2B2P49770 351 aaKnown RBP1.49□□□□□ -2.17
PTPN12-202ENST00000407343 DEFA1P59665 94 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 SPCS2Q15005 226 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 KCNJ8Q15842 424 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 BRMS1LQ5PSV4 323 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 GOLT1AQ6ZVE7 132 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 ST6GALNAC3Q8NDV1 305 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 OR11H6Q8NGC7 330 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 GRPEL2Q8TAA5 225 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 RMND5BQ96G75 393 aaPredicted RBP1.49□□□□□ -2.17
PTPN12-202ENST00000407343 TSPAN32Q96QS1 320 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 TMEM147Q9BVK8 224 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 LRTM1Q9HBL6 345 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 MED29Q9NX70 200 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 OR52A1Q9UKL2 312 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 PRNDQ9UKY0 176 aa1.49□□□□□ -2.17
PTPN12-202ENST00000407343 RP1P56715 2156 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 A0A1W2PRE2 83 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 HMGB3O15347 200 aaKnown RBP1.48□□□□□ -2.17
PTPN12-202ENST00000407343 NDUFA2O43678 99 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 ZNF682O95780 498 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 HLA-DRB1P01911 266 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 SERPINE1P05121 402 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 SPI1P17947 270 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 HIST1H2BOP23527 126 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 HIST1H2BBP33778 126 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 G6PCP35575 357 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 GLRXP35754 106 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 HIST1H2BDP58876 126 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 HIST1H2BCP62807 126 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 GNG5P63218 68 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 HIST2H2BEQ16778 126 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 DEFB115Q30KQ5 88 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 C12orf74Q32Q52 190 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 CCDC153Q494R4 210 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 TMEM128Q5BJH2 165 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.48□□□□□ -2.17
PTPN12-202ENST00000407343 RPS19BP1Q86WX3 136 aaKnown RBP1.48□□□□□ -2.17
PTPN12-202ENST00000407343 C12orf45Q8N5I9 185 aaPredicted RBP1.48□□□□□ -2.17
PTPN12-202ENST00000407343 ANKRD29Q8N6D5 301 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 OR13C4Q8NGS5 318 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 GNPDA2Q8TDQ7 276 aa1.48□□□□□ -2.17
PTPN12-202ENST00000407343 CT55Q8WUE5 264 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms