RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 LEMD1Q68G75 181 aa8.91□□□□□ -0.98
APOBEC3B-204ENST00000407298 Q6ZRM9 215 aa8.91□□□□□ -0.98
APOBEC3B-204ENST00000407298 CCDC190Q86UF4 302 aa8.91□□□□□ -0.98
APOBEC3B-204ENST00000407298 OR4A16Q8NH70 328 aa8.91□□□□□ -0.98
APOBEC3B-204ENST00000407298 GLYATL2Q8WU03 294 aa8.91□□□□□ -0.98
APOBEC3B-204ENST00000407298 PRRT1Q99946 306 aa8.91□□□□□ -0.98
APOBEC3B-204ENST00000407298 NDUFAF3Q9BU61 184 aa8.91□□□□□ -0.98
APOBEC3B-204ENST00000407298 TMEM222Q9H0R3 208 aa8.91□□□□□ -0.98
APOBEC3B-204ENST00000407298 VSIRQ9H7M9 311 aa8.91□□□□□ -0.98
APOBEC3B-204ENST00000407298 IGHV3OR16-13A0A075B7E8 117 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 DEFB131BA0A096LNP1 70 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 IGHV3-74A0A0B4J1X5 117 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 A0A1W2PS18 150 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 CCDC160A6NGH7 325 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 CRYM-AS1A6NIL9 109 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 ZNF705EA8MWA4 302 aaPredicted RBP8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 I3L2K1 104 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 ZNF701M0R085 212 aaPredicted RBP8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 CDS2O95674 445 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 AMBPP02760 352 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 NPY1RP25929 384 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 AKR1C2P52895 323 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 TRIM16LQ309B1 348 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 AARDQ4LEZ3 155 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 MISP3Q96FF7 219 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 RABAC1Q9UI14 185 aa8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 C14orf166Q9Y224 244 aaKnown RBP8.9□□□□□ -0.98
APOBEC3B-204ENST00000407298 FAT2Q9NYQ8 4349 aa8.9□□□□□ -0.99
APOBEC3B-204ENST00000407298 INS-IGF2F8WCM5 200 aa8.89□□□□□ -0.99
APOBEC3B-204ENST00000407298 RTL8CO15255 209 aa8.89□□□□□ -0.99
APOBEC3B-204ENST00000407298 B3GALNT1O75752 331 aa8.89□□□□□ -0.99
APOBEC3B-204ENST00000407298 NPBWR1P48145 328 aa8.89□□□□□ -0.99
APOBEC3B-204ENST00000407298 LINC01559Q495D7 138 aa8.89□□□□□ -0.99
APOBEC3B-204ENST00000407298 SOHLH1Q5JUK2 328 aa8.89□□□□□ -0.99
APOBEC3B-204ENST00000407298 SELENOHQ8IZQ5 122 aaKnown RBP8.89□□□□□ -0.99
APOBEC3B-204ENST00000407298 ST8SIA2Q92186 375 aa8.89□□□□□ -0.99
APOBEC3B-204ENST00000407298 PRR13Q9NZ81 148 aa8.89□□□□□ -0.99
APOBEC3B-204ENST00000407298 TBC1D24Q9ULP9 559 aa8.89□□□□□ -0.99
APOBEC3B-204ENST00000407298 TEX13DA0A0J9YY54 714 aaPredicted RBP8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 M0R2N4 97 aa8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 MT-CO2P00403 227 aa8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 IFNA10P01566 189 aa8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 IFNA21P01568 189 aa8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 IFNA17P01571 189 aa8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 SUPT4H1P63272 117 aaKnown RBP8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 ERHP84090 104 aaKnown RBP8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 TOMM20LQ6UXN7 152 aa8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 ZNF600Q6ZNG1 722 aa8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 GRAMD2BQ96HH9 432 aa8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 NARS2Q96I59 477 aaKnown RBP8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 TMEM56-RWDD3S4R434 201 aa8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 DNAH2Q9P225 4427 aa8.88□□□□□ -0.99
APOBEC3B-204ENST00000407298 ELOA3CA0A087WX78 387 aaPredicted RBP8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 SCGB2A1O75556 95 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 IGHV3-48P01763 117 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 GIG44P09565 113 aaPredicted RBP8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 RNASE2P10153 161 aaKnown RBP8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 NPPCP23582 126 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 ETV6P41212 452 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 EIF2B2P49770 351 aaKnown RBP8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 BSXQ3C1V8 233 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 PYDC2Q56P42 97 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 RBPMSQ93062 196 aaKnown RBP8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 GPR146Q96CH1 333 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 SRRQ9GZT4 340 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 MCUBQ9NWR8 336 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 SCP2D1Q9UJQ7 156 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 X6R8D5 127 aa8.87□□□□□ -0.99
APOBEC3B-204ENST00000407298 ATG12O94817 140 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 APOHP02749 345 aaPredicted RBP8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 NUTF2P61970 127 aaKnown RBP8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 DHODHQ02127 395 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 C12orf74Q32Q52 190 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 TMEM268Q5VZI3 342 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 FAM219AQ8IW50 185 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 LILRB2Q8N423 598 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 SLC35G3Q8N808 338 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 STXBP6Q8NFX7 210 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 PINX1Q96BK5 328 aaKnown RBP8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 RRNAD1Q96FB5 475 aaKnown RBP8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 FAM210BQ96KR6 192 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 C1QTNF4Q9BXJ3 329 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 MRPL36Q9P0J6 103 aaKnown RBP8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 CACNG5Q9UF02 275 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 PUS1Q9Y606 427 aaKnown RBP eCLIP8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 PKD1P98161 4303 aa8.86□□□□□ -0.99
APOBEC3B-204ENST00000407298 IGHV3-66A0A0C4DH42 116 aa8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 K7EQG2 157 aa8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 S100A5P33763 92 aa8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 HOXA1P49639 335 aaPredicted RBP8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 NMSQ5H8A3 153 aa8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 UBE2DNLQ8IWF7 75 aa8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 TOMM5Q8N4H5 51 aa8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 FAM24BQ8N5W8 94 aa8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 OR52E5Q8NH55 327 aa8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 RNASE11Q8TAA1 199 aaKnown RBP8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 TMEM170AQ8WVE7 144 aa8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 IL22RA2Q969J5 263 aa8.85□□□□□ -0.99
APOBEC3B-204ENST00000407298 METTL26Q96S19 204 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms