RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 DEFB1P60022 68 aa9.22□□□□□ -0.93
PRAME-206ENST00000406503 DHRS2Q13268 280 aa9.22□□□□□ -0.93
PRAME-206ENST00000406503 RNASE10Q5GAN6 216 aaKnown RBP9.22□□□□□ -0.93
PRAME-206ENST00000406503 GDF5OSQ5U4N7 250 aa9.22□□□□□ -0.93
PRAME-206ENST00000406503 ARRDC1Q8N5I2 433 aa9.22□□□□□ -0.93
PRAME-206ENST00000406503 POM121L12Q8N7R1 296 aa9.22□□□□□ -0.93
PRAME-206ENST00000406503 OR13C8Q8NGS7 320 aa9.22□□□□□ -0.93
PRAME-206ENST00000406503 PDCD10Q9BUL8 212 aa9.22□□□□□ -0.93
PRAME-206ENST00000406503 FUNDC2Q9BWH2 189 aa9.22□□□□□ -0.93
PRAME-206ENST00000406503 SMIM31A0A1B0GVY4 71 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 H3BMM0 161 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 CD74P04233 296 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 HNRNPCP07910 306 aaKnown RBP eCLIP9.21□□□□□ -0.942e-6■□□□□ 10
PRAME-206ENST00000406503 SPCS3P61009 180 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 DHODHQ02127 395 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 TRIM16LQ309B1 348 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 ZNF705AQ6ZN79 300 aaPredicted RBP9.21□□□□□ -0.94
PRAME-206ENST00000406503 OR1S2Q8NGQ3 325 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 MARCH1Q8TCQ1 289 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 GLYATL2Q8WU03 294 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 ABHD1Q96SE0 405 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 XCL2Q9UBD3 114 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 MTFP1Q9UDX5 166 aa9.21□□□□□ -0.94
PRAME-206ENST00000406503 TRAV30A0A087WSZ9 112 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 PRSS29PA6NIE9 313 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 M0R2N4 97 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 BUB3O43684 328 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 CDS2O95674 445 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 OR5AC1P0C628 307 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 MED14OSP0DP75 135 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 OR10J1P30954 320 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 HTR2BP41595 481 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 YPEL3P61236 119 aaPredicted RBP9.2□□□□□ -0.94
PRAME-206ENST00000406503 C2orf83Q53S99 150 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 OR52E5Q8NH55 327 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 RTBDNQ9BSG5 229 aaPredicted RBP9.2□□□□□ -0.94
PRAME-206ENST00000406503 NRN1Q9NPD7 142 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 COPZ2Q9P299 210 aa9.2□□□□□ -0.94
PRAME-206ENST00000406503 ZNF705FA8MVS1 300 aaPredicted RBP9.19□□□□□ -0.94
PRAME-206ENST00000406503 ATG12O94817 140 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 IL4P05112 153 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 ZNF705DP0CH99 300 aaPredicted RBP9.19□□□□□ -0.94
PRAME-206ENST00000406503 ZNF705BP0CI00 300 aaPredicted RBP9.19□□□□□ -0.94
PRAME-206ENST00000406503 P0DMU3 169 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 FAM231AP0DMU4 169 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 FAM231CP0DMU5 169 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 HLA-DRB4P13762 266 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 FAAP20Q6NZ36 180 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 GSG1LQ6UXU4 331 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 SELENOHQ8IZQ5 122 aaKnown RBP9.19□□□□□ -0.94
PRAME-206ENST00000406503 CCDC71LQ8N9Z2 235 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 SLC24A4Q8NFF2 622 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 TERB2Q8NHR7 220 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 GPR146Q96CH1 333 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 RRNAD1Q96FB5 475 aaKnown RBP9.19□□□□□ -0.94
PRAME-206ENST00000406503 KRTAP4-5Q9BYR2 181 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 NAA50Q9GZZ1 169 aaKnown RBP9.19□□□□□ -0.94
PRAME-206ENST00000406503 TMEM222Q9H0R3 208 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 SEPSECSQ9HD40 501 aaKnown RBP9.19□□□□□ -0.94
PRAME-206ENST00000406503 ENY2Q9NPA8 101 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 CACNG5Q9UF02 275 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 HLA-DRB4X5D2U9 266 aa9.19□□□□□ -0.94
PRAME-206ENST00000406503 RPS10-NUDT3A0A1W2PQS6 291 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 TOMM40O96008 361 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 TBPP20226 339 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 AP2S1P53680 142 aaPredicted RBP9.18□□□□□ -0.94
PRAME-206ENST00000406503 MEF2DQ14814 521 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 LGALS9BQ3B8N2 356 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 SIGLEC15Q6ZMC9 328 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 Q6ZR54 194 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 FAM219AQ8IW50 185 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 ZNF709Q8N972 641 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 TMEM229BQ8NBD8 167 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 ZFAND1Q8TCF1 268 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 RNASEH2CQ8TDP1 164 aaKnown RBP9.18□□□□□ -0.94
PRAME-206ENST00000406503 Q8WTZ3 238 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 NPIPB3Q92617 1050 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 NARS2Q96I59 477 aaKnown RBP9.18□□□□□ -0.94
PRAME-206ENST00000406503 NEU1Q99519 415 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 NDUFAF3Q9BU61 184 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 WDR12Q9GZL7 423 aaKnown RBP9.18□□□□□ -0.94
PRAME-206ENST00000406503 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.18□□□□□ -0.94
PRAME-206ENST00000406503 EXTL2Q9UBQ6 330 aa9.18□□□□□ -0.94
PRAME-206ENST00000406503 TEX13DA0A0J9YY54 714 aaPredicted RBP9.17□□□□□ -0.94
PRAME-206ENST00000406503 FAM25AB3EWG3 89 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 FAM25CB3EWG5 89 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 FAM25GB3EWG6 89 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 SOCS3O14543 225 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 PSG1P11464 419 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 SLC25A4P12235 298 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 FXYD7P58549 80 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 CTF1Q16619 201 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 SCGB2B2Q4G0G5 96 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 STEAP1BQ6NZ63 245 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 RNASE11Q8TAA1 199 aaKnown RBP9.17□□□□□ -0.94
PRAME-206ENST00000406503 RBPMSQ93062 196 aaKnown RBP9.17□□□□□ -0.94
PRAME-206ENST00000406503 C1QTNF4Q9BXJ3 329 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 MIXL1Q9H2W2 232 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 NAA60Q9H7X0 242 aa9.17□□□□□ -0.94
PRAME-206ENST00000406503 HEYLQ9NQ87 328 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms