RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 OR5AU1Q8NGC0 362 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 OR10X1Q8NGY0 326 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 TSKUQ8WUA8 353 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 RND1Q92730 232 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 NUDT11Q96G61 164 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 WFIKKN1Q96NZ8 548 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 RCHY1Q96PM5 261 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 TBX15Q96SF7 602 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 PAXXQ9BUH6 204 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 TMEM133Q9H2Q1 129 aa3.09□□□□□ -1.92
RTN4-209ENST00000405240 FAM231BA6NCW3 169 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 I3L2K1 104 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 CRXO43186 299 aaPredicted RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 APOHP02749 345 aaPredicted RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 PRRX1P54821 245 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 CCL8P80075 99 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 GAGE1Q13065 139 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 MMDQ15546 238 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 TBR1Q16650 682 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 FBXL19-AS1Q494R0 122 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 LRRC10Q5BKY1 277 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 FAM120AOSQ5T036 256 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 SPACA3Q8IXA5 215 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 PRSS33Q8NF86 280 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 NUP35Q8NFH5 326 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 C18orf32Q8TCD1 76 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 NPIPB3Q92617 1050 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 URB1-AS1Q96HZ7 61 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 RBM14Q96PK6 669 aaKnown RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 CHRDL1Q9BU40 450 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 TPSG1Q9NRR2 321 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 EPDR1Q9UM22 224 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 ASPMQ8IZT6 3477 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 ZDBF2Q9HCK1 2354 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 M0R143 59 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 MRPS12O15235 138 aaKnown RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 NDUFB3O43676 98 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 ZNF324O75467 553 aaPredicted RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 SCGB1D1O95968 90 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 PYYP10082 97 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 NBL1P41271 181 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 BPIFB3P59826 476 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 SLAQ13239 276 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 VMA21Q3ZAQ7 101 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 CYB5R2Q6BCY4 276 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 C19orf35Q6ZS72 473 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 COX8CQ7Z4L0 72 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 FMC1Q96HJ9 113 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 HSPB9Q9BQS6 159 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 ALKBH7Q9BT30 221 aaPredicted RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 SAP30LQ9HAJ7 183 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 SIGLEC9Q9Y336 463 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 SOX21Q9Y651 276 aaPredicted RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 SMG1Q96Q15 3661 aaKnown RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 CORTO00230 105 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 OR7C2O60412 319 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 UBE2L3P68036 154 aaKnown RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 RPL19P84098 196 aaKnown RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 RBPJQ06330 500 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 LINC00305Q7Z4B0 112 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 TGIF2LXQ8IUE1 241 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 NHLRC2Q8NBF2 726 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 PERPQ96FX8 193 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 LINC00479Q96M42 142 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 ZNF48Q96MX3 618 aaPredicted RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 NRN1Q9NPD7 142 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 NAT8BQ9UHF3 227 aa3.08□□□□□ -1.92
RTN4-209ENST00000405240 F11RQ9Y624 299 aaKnown RBP3.08□□□□□ -1.92
RTN4-209ENST00000405240 TNCP24821 2201 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 IGHV2-26A0A0B4J1V2 119 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 C2orf70A6NJV1 201 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 BUB1B-PAK6H3BSN5 160 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 COX7A2P2O60397 106 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 APCSP02743 223 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 FXYD3Q14802 87 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 C10orf55Q5SWW7 151 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 LINC00322Q6ZN03 302 aaPredicted RBP3.07□□□□□ -1.92
RTN4-209ENST00000405240 NPBQ8NG41 125 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 OR4B1Q8NGF8 309 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 OR8B3Q8NGG8 313 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 OR8B2Q96RD0 313 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 TBL2Q9Y4P3 447 aaKnown RBP3.07□□□□□ -1.92
RTN4-209ENST00000405240 DSPP15924 2871 aaKnown RBP3.07□□□□□ -1.92
RTN4-209ENST00000405240 IGHV1-3A0A0C4DH29 117 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 B9A039 149 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 ZNF253O75346 499 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 IGLC1P0CG04 106 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 APOBEC3AP31941 199 aaPredicted RBP3.07□□□□□ -1.92
RTN4-209ENST00000405240 GPR82Q96P67 336 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 ATG101Q9BSB4 218 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 HINT2Q9BX68 163 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 CBLN4Q9NTU7 201 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 ARFGEF3Q5TH69 2177 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 BDP1A6H8Y1 2624 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 CFAP47Q6ZTR5 3102 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 WI2-2373I1.2A0A1W2PRP0 233 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 PRRG2O14669 202 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 NDUFA3O95167 84 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 MOSP00540 346 aa3.07□□□□□ -1.92
RTN4-209ENST00000405240 CD33P20138 364 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms