RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 NPFFR1Q9GZQ6 430 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 ZMAT5Q9UDW3 170 aaKnown RBP2.91□□□□□ -1.94
RTN4-208ENST00000404909 ATRQ13535 2644 aa2.91□□□□□ -1.94
RTN4-208ENST00000404909 IGHV3-35A0A0C4DH35 117 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 A0A1W2PPV4 95 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 FAM181BA6NEQ2 426 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 OR2T8A6NH00 312 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 DNAJC9-AS1A6NH13 148 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 INAFM1C9JVW0 142 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 GNG7O60262 68 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 MBP02144 154 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 TRGV3P03979 118 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 IGF1P05019 195 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 LINC00869P0C866 280 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 PF4V1P10720 104 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 M6PRP20645 277 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 NPBWR1P48145 328 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 ACOT6Q3I5F7 207 aaPredicted RBP2.9□□□□□ -1.94
RTN4-208ENST00000404909 PVRIGQ6DKI7 326 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 CYP2G1PQ6ZSU1 146 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 RCC1LQ96I51 464 aaKnown RBP2.9□□□□□ -1.94
RTN4-208ENST00000404909 PRSS22Q9GZN4 317 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 KCNIP2Q9NS61 270 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 SLC39A9Q9NUM3 307 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 C21orf62Q9NYP8 219 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 SLC45A2Q9UMX9 530 aa2.9□□□□□ -1.94
RTN4-208ENST00000404909 IGKV1D-37A0A075B6S9 117 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 TCRBV4S1A1TA0A5B7 111 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 YIF1AO95070 293 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 OR5G3P0C626 314 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 ORM2P19652 201 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 GPR183P32249 361 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 RPL29P47914 159 aaKnown RBP2.9□□□□□ -1.95
RTN4-208ENST00000404909 MFAP4P55083 255 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 TPPP2P59282 170 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 SCGB2A2Q13296 93 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 TIGITQ495A1 244 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 SSX7Q7RTT5 188 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 CENPVQ7Z7K6 275 aaPredicted RBP2.9□□□□□ -1.95
RTN4-208ENST00000404909 OR4X1Q8NH49 305 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 NARS2Q96I59 477 aaKnown RBP2.9□□□□□ -1.95
RTN4-208ENST00000404909 PBDC1Q9BVG4 233 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 PRDM13Q9H4Q3 707 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 GNB4Q9HAV0 340 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 ESM1Q9NQ30 184 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 CDC42EP3Q9UKI2 254 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 MAP1LC3B2A6NCE7 125 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 LINC00862A6NCI5 91 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 CLN5O75503 358 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 IGHV3-11P01762 117 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 CLEC3BP05452 202 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 IGLC1P0CG04 106 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 HIST1H1BP16401 226 aaKnown RBP2.9□□□□□ -1.95
RTN4-208ENST00000404909 CDC34P49427 236 aaPredicted RBP2.9□□□□□ -1.95
RTN4-208ENST00000404909 CCL20P78556 96 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 ZNF726P1Q15940 193 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 FAM78BQ5VT40 261 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 C10orf99Q6UWK7 81 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 NECAP1Q8NC96 275 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 OR1B1Q8NGR6 318 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 RAB24Q969Q5 203 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 UHRF2Q96PU4 802 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 ACTR3CQ9C0K3 210 aaPredicted RBP2.9□□□□□ -1.95
RTN4-208ENST00000404909 MAP1LC3BQ9GZQ8 125 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 KLK15Q9H2R5 256 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 TMEM231Q9H6L2 316 aa2.9□□□□□ -1.95
RTN4-208ENST00000404909 SEPSECSQ9HD40 501 aaKnown RBP2.9□□□□□ -1.95
RTN4-208ENST00000404909 IGHV3OR16-8A0A075B7F1 116 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 COX7A2P2O60397 106 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 IGKV1-17P01599 117 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 RD3LP0DJH9 198 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 PSG1P11464 419 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 PPIFP30405 207 aaKnown RBP2.89□□□□□ -1.95
RTN4-208ENST00000404909 LYZP61626 148 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 PRR20EP86478 221 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 PRR20CP86479 221 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 PRR20DP86480 221 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 PRR20BP86481 221 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 PRR20AP86496 221 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 ATP5G2Q06055 141 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 SPATA31B1PQ5VZV4 182 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 CLEC19AQ6UXS0 136 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 DPPA3Q6W0C5 159 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 THAP8Q8NA92 274 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 ZNF418Q8TF45 676 aaPredicted RBP2.89□□□□□ -1.95
RTN4-208ENST00000404909 MARC2Q969Z3 335 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 OR5B12Q96R08 314 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 EIF5A2Q9GZV4 153 aaKnown RBP2.89□□□□□ -1.95
RTN4-208ENST00000404909 TMPRSS5Q9H3S3 457 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 ZNF702PQ9H963 129 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 TRBV9A0A0B4J1U6 114 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 CTXND1A0A1B0GTU2 59 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 LOC105371267A0A1B0GV96 52 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 NUPL2O15504 423 aaKnown RBP2.89□□□□□ -1.95
RTN4-208ENST00000404909 CRYBA1P05813 215 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 SELENOTP62341 195 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 HAGHQ16775 308 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 TMEM37Q8WXS4 190 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 EEF1AKMT3Q96AZ1 226 aa2.89□□□□□ -1.95
RTN4-208ENST00000404909 TRGV9Q99603 122 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms