RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 K7EIM0 57 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 TCF21O43680 179 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 YIF1AO95070 293 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 IGHG2P01859 326 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 CDC34P49427 236 aaPredicted RBP16.49■□□□□ 0.23
TPM1-208ENST00000404484 KLK9Q2XQG4 91 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 FAM122CQ6P4D5 195 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 SLC35E3Q7Z769 313 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 BPIFCQ8NFQ6 507 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 OR5T1Q8NG75 326 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 PBDC1Q9BVG4 233 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 C19orf24Q9BVV8 132 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 TNFRSF19Q9NS68 423 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 KLK9Q9UKQ9 250 aa16.49■□□□□ 0.23
TPM1-208ENST00000404484 A0A1W2PPV4 95 aa16.48■□□□□ 0.23
TPM1-208ENST00000404484 MAP1LC3B2A6NCE7 125 aa16.48■□□□□ 0.23
TPM1-208ENST00000404484 SH2D7A6NKC9 451 aaPredicted RBP16.48■□□□□ 0.23
TPM1-208ENST00000404484 IGHV3-48P01763 117 aa16.48■□□□□ 0.23
TPM1-208ENST00000404484 IGF1P05019 195 aa16.48■□□□□ 0.23
TPM1-208ENST00000404484 FABP1P07148 127 aa16.48■□□□□ 0.23
TPM1-208ENST00000404484 ZNF726P1Q15940 193 aa16.48■□□□□ 0.23
TPM1-208ENST00000404484 SPSB3Q6PJ21 355 aa16.48■□□□□ 0.23
TPM1-208ENST00000404484 MAP1LC3BQ9GZQ8 125 aa16.48■□□□□ 0.23
TPM1-208ENST00000404484 MRPL36Q9P0J6 103 aaKnown RBP16.48■□□□□ 0.23
TPM1-208ENST00000404484 TRAV41A0A0B4J266 112 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 I3L521 148 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 SCGB2A1O75556 95 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 LINC00869P0C866 280 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 SLC25A22Q9H936 323 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 IGKV1D-37A0A075B6S9 117 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 IGHV3-21A0A0B4J1V1 117 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 NPBWR1P48145 328 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 RHOBP62745 196 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 LCN15Q6UWW0 184 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 RAB24Q969Q5 203 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 ZNF48Q96MX3 618 aaPredicted RBP16.47■□□□□ 0.23
TPM1-208ENST00000404484 FAM210AQ96ND0 272 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 ZNF580Q9UK33 172 aa16.47■□□□□ 0.23
TPM1-208ENST00000404484 DNHD1Q96M86 4753 aa16.46■□□□□ 0.23
TPM1-208ENST00000404484 TRAV30A0A087WSZ9 112 aa16.46■□□□□ 0.23
TPM1-208ENST00000404484 AP4M1O00189 453 aa16.46■□□□□ 0.23
TPM1-208ENST00000404484 CLN5O75503 358 aa16.46■□□□□ 0.23
TPM1-208ENST00000404484 MFAP4P55083 255 aa16.46■□□□□ 0.23
TPM1-208ENST00000404484 KRTAP24-1Q3LI83 254 aa16.46■□□□□ 0.23
TPM1-208ENST00000404484 VN1R17PQ8TDU5 208 aa16.46■□□□□ 0.23
TPM1-208ENST00000404484 ZNF418Q8TF45 676 aaPredicted RBP16.46■□□□□ 0.23
TPM1-208ENST00000404484 RNF2Q99496 336 aa16.46■□□□□ 0.23
TPM1-208ENST00000404484 A0A1B0GV50 99 aa16.45■□□□□ 0.22
TPM1-208ENST00000404484 LINC01548A6NM66 108 aa16.45■□□□□ 0.22
TPM1-208ENST00000404484 C19orf54Q5BKX5 351 aa16.45■□□□□ 0.22
TPM1-208ENST00000404484 TMEM86BQ8N661 226 aa16.45■□□□□ 0.22
TPM1-208ENST00000404484 OR1L4Q8NGR5 311 aa16.45■□□□□ 0.22
TPM1-208ENST00000404484 TMEM158Q8WZ71 300 aa16.45■□□□□ 0.22
TPM1-208ENST00000404484 PFDN5Q99471 154 aa16.45■□□□□ 0.22
TPM1-208ENST00000404484 FBXL7Q9UJT9 491 aa16.45■□□□□ 0.22
TPM1-208ENST00000404484 KRBOX1C9JBD0 128 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 G3V318 75 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 OR2J3O76001 311 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 IGLC1P0CG04 106 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 PEA15Q15121 130 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 GUK1Q16774 197 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 GCSAMLQ5JQS6 135 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 NECAP1Q8NC96 275 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 TXN2Q99757 166 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 SMDT1Q9H4I9 107 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 ZNF355PQ9NSJ1 428 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 C21orf62Q9NYP8 219 aa16.44■□□□□ 0.22
TPM1-208ENST00000404484 ANKRD34BA5PLL1 514 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 H3BUA1 57 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 IFNA1P01562 189 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 HILS1P60008 231 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 BLCAPP62952 87 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 PMS2P11Q13670 270 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 RBMS3Q6XE24 437 aaKnown RBP16.43■□□□□ 0.22
TPM1-208ENST00000404484 SSX7Q7RTT5 188 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 GATAD1Q8WUU5 269 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 TREM1Q9NP99 234 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 STAB1Q9NY15 2570 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 TRBV9A0A0B4J1U6 114 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 HOXA3O43365 443 aaPredicted RBP16.43■□□□□ 0.22
TPM1-208ENST00000404484 NDUFB8O95169 186 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 BRI3O95415 125 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 FCGR2BP31994 310 aaPredicted RBP16.43■□□□□ 0.22
TPM1-208ENST00000404484 ZNF90Q03938 601 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 SIGLECL1Q8N7X8 197 aa16.43■□□□□ 0.22
TPM1-208ENST00000404484 NARS2Q96I59 477 aaKnown RBP16.43■□□□□ 0.22
TPM1-208ENST00000404484 MRPL32Q9BYC8 188 aaKnown RBP16.43■□□□□ 0.22
TPM1-208ENST00000404484 EIF5A2Q9GZV4 153 aaKnown RBP16.43■□□□□ 0.22
TPM1-208ENST00000404484 GAR1Q9NY12 217 aaKnown RBP16.43■□□□□ 0.22
TPM1-208ENST00000404484 GNG7O60262 68 aa16.42■□□□□ 0.22
TPM1-208ENST00000404484 COX7A2P2O60397 106 aa16.42■□□□□ 0.22
TPM1-208ENST00000404484 GATA2P23769 480 aaPredicted RBP16.42■□□□□ 0.22
TPM1-208ENST00000404484 PPT1P50897 306 aa16.42■□□□□ 0.22
TPM1-208ENST00000404484 CCL20P78556 96 aa16.42■□□□□ 0.22
TPM1-208ENST00000404484 RHOGP84095 191 aa16.42■□□□□ 0.22
TPM1-208ENST00000404484 TOR2AQ5JU69 321 aa16.42■□□□□ 0.22
TPM1-208ENST00000404484 NPFFR1Q9GZQ6 430 aa16.42■□□□□ 0.22
TPM1-208ENST00000404484 ESM1Q9NQ30 184 aa16.42■□□□□ 0.22
TPM1-208ENST00000404484 ELOA3CA0A087WX78 387 aaPredicted RBP16.41■□□□□ 0.22
TPM1-208ENST00000404484 RBFOX3A6NFN3 312 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms