RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 CR1P17927 2039 aa0.88□□□□□ -2.27
CBX3P9-201ENST00000402326 MED1Q15648 1581 aaPredicted RBP0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 KIF1BO60333 1816 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 J3QRK9 145 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 OR2B3O76000 313 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 TCL1BO95988 128 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 OR4E1P0C645 316 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 MGST1P10620 155 aaKnown RBP0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 COX6A1P12074 109 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 G0S2P27469 103 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 YPEL3P61236 119 aaPredicted RBP0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 HSPE1P61604 102 aaKnown RBP0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 CDK5R1Q15078 307 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 RNASE10Q5GAN6 216 aaKnown RBP0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 DEFB128Q7Z7B8 93 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 STAG3L4Q8TBR4 150 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 FAM172AQ8WUF8 416 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 HIST1H2BLQ99880 126 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 NAA38Q9BRA0 125 aaKnown RBP0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 ADAT1Q9BUB4 502 aaKnown RBP0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 PARVBQ9HBI1 364 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 STOML2Q9UJZ1 356 aa0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 UTP11Q9Y3A2 253 aaKnown RBP0.87□□□□□ -2.27
CBX3P9-201ENST00000402326 DOCK3Q8IZD9 2030 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 TRBV19A0A075B6N1 114 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 OR2T1O43869 369 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 CST8O60676 142 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 BANF1O75531 89 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 ATG12O94817 140 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 C1QBP02746 253 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 SSR2P43308 183 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 NCALDP61601 193 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 RPL19P84098 196 aaKnown RBP0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 SURF2Q15527 256 aaPredicted RBP0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 TSNQ15631 228 aaKnown RBP0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 C10orf55Q5SWW7 151 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 LYRM7Q5U5X0 104 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 Q8N2B8 174 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 LINC00471Q8N535 108 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 OR4D11Q8NGI4 311 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 OR13D1Q8NGV5 346 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 AP3S1Q92572 193 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 HOPXQ9BPY8 73 aaPredicted RBP0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 REG4Q9BYZ8 158 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 TMEM133Q9H2Q1 129 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 SS18L2Q9UHA2 77 aa0.86□□□□□ -2.27
CBX3P9-201ENST00000402326 TRAV14DV4A0A0A6YYC5 116 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 IGKV2-29A2NJV5 120 aaPredicted RBP0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 FUOMA2VDF0 154 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 C2orf70A6NJV1 201 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 TMEM238C9JI98 176 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 G3V2T6 193 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 SULT1B1O43704 296 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 IFNA7P01567 189 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 RNASE4P34096 147 aaKnown RBP0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 GNG10P50151 68 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 GNG5P63218 68 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 EIF5AP63241 154 aaKnown RBP0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 KRR1Q13601 381 aaKnown RBP0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 RRN3P1Q2M238 152 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 BRMS1LQ5PSV4 323 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 RPS19BP1Q86WX3 136 aaKnown RBP0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 EXOC3-AS1Q8N2X6 119 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 LINC00311Q8N616 119 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 OR10J5Q8NHC4 309 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 SLAMF6Q96DU3 332 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 SERPINI1Q99574 410 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 PAIP2Q9BPZ3 127 aaKnown RBP0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 RNF122Q9H9V4 155 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 TAS2R4Q9NYW5 299 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 EPDR1Q9UM22 224 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 FCGBPQ9Y6R7 5405 aaPredicted RBP0.85□□□□□ -2.27
CBX3P9-201ENST00000402326 COL4A5P29400 1685 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 BAZ2BQ9UIF8 2168 aaKnown RBP0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 MICAL3Q7RTP6 2002 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 FMN1Q68DA7 1419 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 F8W036 122 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 C19orf84I3L1E1 186 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 TAX1BP3O14907 124 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 NEFHP12036 1026 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 RNASE3P12724 160 aaKnown RBP0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 SRP14P37108 136 aaKnown RBP0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 DYNLT1P63172 113 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 DEFB113Q30KQ7 82 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 SPANXN5Q5MJ07 72 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 SOSTDC1Q6X4U4 206 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 LYG2Q86SG7 212 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 SMIM20Q8N5G0 67 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 GINS3Q9BRX5 216 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 PRADC1Q9BSG0 188 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 MIXL1Q9H2W2 232 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 GID8Q9NWU2 228 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 OR5AC2Q9NZP5 309 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 PRNDQ9UKY0 176 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 PYCARDQ9ULZ3 195 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 SLC35A3Q9Y2D2 325 aa0.84□□□□□ -2.27
CBX3P9-201ENST00000402326 RIMBP3CA6NJZ7 1639 aa0.84□□□□□ -2.28
CBX3P9-201ENST00000402326 RIMBP3BA6NNM3 1639 aa0.84□□□□□ -2.28
CBX3P9-201ENST00000402326 RIMBP3Q9UFD9 1639 aa0.84□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms