RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CSMD1Q96PZ7 3565 aa20.15■□□□□ 0.82
CPNE1-205ENST00000401607 C19orf24Q9BVV8 132 aa20.15■□□□□ 0.82
CPNE1-205ENST00000401607 MANBALQ9NQG1 85 aa20.15■□□□□ 0.82
CPNE1-205ENST00000401607 CELSR1Q9NYQ6 3014 aa20.15■□□□□ 0.82
CPNE1-205ENST00000401607 CXorf1O96002 111 aa20.14■□□□□ 0.81
CPNE1-205ENST00000401607 SPNS3Q6ZMD2 512 aa20.14■□□□□ 0.81
CPNE1-205ENST00000401607 CYB561D1Q8N8Q1 229 aa20.14■□□□□ 0.81
CPNE1-205ENST00000401607 FAM110DQ8TAY7 271 aaPredicted RBP20.14■□□□□ 0.81
CPNE1-205ENST00000401607 ABCA1O95477 2261 aa20.14■□□□□ 0.81
CPNE1-205ENST00000401607 ECSCRQ19T08 205 aa20.13■□□□□ 0.81
CPNE1-205ENST00000401607 DEFB112Q30KQ8 113 aa20.13■□□□□ 0.81
CPNE1-205ENST00000401607 UNQ5815/PRO19632Q6UWF5 114 aa20.13■□□□□ 0.81
CPNE1-205ENST00000401607 CYB5R2Q6BCY4 276 aa20.13■□□□□ 0.81
CPNE1-205ENST00000401607 TMUB1Q9BVT8 246 aa20.13■□□□□ 0.81
CPNE1-205ENST00000401607 PRRC2AP48634 2157 aaKnown RBP20.12■□□□□ 0.81
CPNE1-205ENST00000401607 CLN5O75503 358 aa20.12■□□□□ 0.81
CPNE1-205ENST00000401607 CD81P60033 236 aa20.12■□□□□ 0.81
CPNE1-205ENST00000401607 PATE2Q6UY27 113 aa20.12■□□□□ 0.81
CPNE1-205ENST00000401607 CIARTQ8N365 385 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-205ENST00000401607 DNAJC4Q9NNZ3 241 aa20.12■□□□□ 0.81
CPNE1-205ENST00000401607 DOK5Q9P104 306 aa20.12■□□□□ 0.81
CPNE1-205ENST00000401607 MAP1AP78559 2803 aaPredicted RBP20.11■□□□□ 0.81
CPNE1-205ENST00000401607 MEF2BQ02080 365 aaPredicted RBP20.11■□□□□ 0.81
CPNE1-205ENST00000401607 SOHLH1Q5JUK2 328 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 NKX6-2Q9C056 277 aaPredicted RBP20.11■□□□□ 0.81
CPNE1-205ENST00000401607 ZFHX3Q15911 3703 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 G3V318 75 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 PAGE4O60829 102 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 NDUFB8O95169 186 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 GCHFRP30047 84 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 TAGLN2P37802 199 aaKnown RBP20.11■□□□□ 0.81
CPNE1-205ENST00000401607 KLK9Q2XQG4 91 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 OR1L4Q8NGR5 311 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 NANPQ8TBE9 248 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 MRPL32Q9BYC8 188 aaKnown RBP20.11■□□□□ 0.81
CPNE1-205ENST00000401607 KLK9Q9UKQ9 250 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 S4R3C0 116 aa20.11■□□□□ 0.81
CPNE1-205ENST00000401607 COX7A2P2O60397 106 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 OR2J3O76001 311 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 NPBWR1P48145 328 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 CEBPGP53567 150 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 TIGITQ495A1 244 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 AKIRIN2Q53H80 203 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 MORN5Q5VZ52 161 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 TMEM68Q96MH6 324 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 PFDN5Q99471 154 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 RNF2Q99496 336 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 PITPNC1Q9UKF7 332 aa20.1■□□□□ 0.81
CPNE1-205ENST00000401607 SNAPINO95295 136 aa20.09■□□□□ 0.81
CPNE1-205ENST00000401607 IGKV1-17P01599 117 aa20.09■□□□□ 0.81
CPNE1-205ENST00000401607 FAM90A2PQ658T7 463 aa20.09■□□□□ 0.81
CPNE1-205ENST00000401607 ZNF503Q96F45 646 aa20.09■□□□□ 0.81
CPNE1-205ENST00000401607 TECRQ9NZ01 308 aaKnown RBP20.09■□□□□ 0.81
CPNE1-205ENST00000401607 THYN1Q9P016 225 aa20.09■□□□□ 0.81
CPNE1-205ENST00000401607 CRIP2P52943 208 aaPredicted RBP20.08■□□□□ 0.81
CPNE1-205ENST00000401607 C10orf113Q5VZT2 155 aa20.08■□□□□ 0.81
CPNE1-205ENST00000401607 F8W735 103 aaPredicted RBP20.08■□□□□ 0.8
CPNE1-205ENST00000401607 UBE2G2P60604 165 aa20.08■□□□□ 0.8
CPNE1-205ENST00000401607 C19orf54Q5BKX5 351 aa20.08■□□□□ 0.8
CPNE1-205ENST00000401607 C9orf139Q6ZV77 190 aa20.08■□□□□ 0.8
CPNE1-205ENST00000401607 ZNF48Q96MX3 618 aaPredicted RBP20.08■□□□□ 0.8
CPNE1-205ENST00000401607 UHRF2Q96PU4 802 aa20.08■□□□□ 0.8
CPNE1-205ENST00000401607 IGHV4-59P01825 116 aa20.07■□□□□ 0.8
CPNE1-205ENST00000401607 C8orf88P0DMB2 117 aa20.07■□□□□ 0.8
CPNE1-205ENST00000401607 PSG1P11464 419 aa20.07■□□□□ 0.8
CPNE1-205ENST00000401607 HIST1H1BP16401 226 aaKnown RBP20.07■□□□□ 0.8
CPNE1-205ENST00000401607 PLP1P60201 277 aa20.07■□□□□ 0.8
CPNE1-205ENST00000401607 C16orf82Q7Z2V1 217 aa20.07■□□□□ 0.8
CPNE1-205ENST00000401607 CLRN3Q8NCR9 226 aa20.07■□□□□ 0.8
CPNE1-205ENST00000401607 FAM167A-AS1Q96KT0 104 aa20.07■□□□□ 0.8
CPNE1-205ENST00000401607 FBXL7Q9UJT9 491 aa20.07■□□□□ 0.8
CPNE1-205ENST00000401607 TRAV5A0A0B4J249 113 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 M0QZK8 103 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 MFAP4P55083 255 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 C9orf152Q5JTZ5 239 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 FOXC2Q99958 501 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 SLC25A2Q9BXI2 301 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 C21orf62Q9NYP8 219 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 ELOA3CA0A087WX78 387 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-205ENST00000401607 ORM2P19652 201 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 TAS2R45P59539 299 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 BTN1A1Q13410 526 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 OR1B1Q8NGR6 318 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 ZNF355PQ9NSJ1 428 aa20.06■□□□□ 0.8
CPNE1-205ENST00000401607 TRBV9A0A0B4J1U6 114 aa20.05■□□□□ 0.8
CPNE1-205ENST00000401607 NDUFS6O75380 124 aaKnown RBP20.05■□□□□ 0.8
CPNE1-205ENST00000401607 ATP5G3P48201 142 aa20.05■□□□□ 0.8
CPNE1-205ENST00000401607 PQLC2Q6ZP29 291 aa20.05■□□□□ 0.8
CPNE1-205ENST00000401607 OR4F5Q8NH21 305 aa20.05■□□□□ 0.8
CPNE1-205ENST00000401607 OR4F4Q96R69 305 aa20.05■□□□□ 0.8
CPNE1-205ENST00000401607 TRAV41A0A0B4J266 112 aa20.04■□□□□ 0.8
CPNE1-205ENST00000401607 C11orf94C9JXX5 98 aa20.04■□□□□ 0.8
CPNE1-205ENST00000401607 IGHG2P01859 326 aa20.04■□□□□ 0.8
CPNE1-205ENST00000401607 IER3P46695 156 aa20.04■□□□□ 0.8
CPNE1-205ENST00000401607 LINC00305Q7Z4B0 112 aa20.04■□□□□ 0.8
CPNE1-205ENST00000401607 PDZD2O15018 2839 aa20.04■□□□□ 0.8
CPNE1-205ENST00000401607 SMAD7O15105 426 aaKnown RBP20.03■□□□□ 0.8
CPNE1-205ENST00000401607 GNG7O60262 68 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 OR7C2O60412 319 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 BLCAPP62952 87 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms