RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 OCC1Q8TAD7 63 aa12.58□□□□□ -0.4
CDC42-203ENST00000400259 ITLN2Q8WWU7 325 aaPredicted RBP12.58□□□□□ -0.4
CDC42-203ENST00000400259 TRGV9Q99603 122 aa12.58□□□□□ -0.4
CDC42-203ENST00000400259 PPP5D1E7EU14 171 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 TIMM23O14925 209 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 COX7A2P2O60397 106 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 DDTP30046 118 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 CEACAM3P40198 252 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 FAM3BP58499 235 aaPredicted RBP12.57□□□□□ -0.4
CDC42-203ENST00000400259 PKIAP61925 76 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 HCP5Q6MZN7 132 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 HIST3H2BBQ8N257 126 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 OR4X1Q8NH49 305 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 BTF3L4Q96K17 158 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 FBXL15Q9H469 300 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 F11RQ9Y624 299 aaKnown RBP12.57□□□□□ -0.4
CDC42-203ENST00000400259 MDFIC2A0A1B0GVS7 189 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 A6NNC1 897 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 ZNF90Q03938 601 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 FOXL1Q12952 345 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 MORN5Q5VZ52 161 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 C10orf113Q5VZT2 155 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 PATE2Q6UY27 113 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 CFHR4Q92496 578 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 MISP3Q96FF7 219 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 PRDM13Q9H4Q3 707 aa12.57□□□□□ -0.4
CDC42-203ENST00000400259 ELOA3CA0A087WX78 387 aaPredicted RBP12.56□□□□□ -0.4
CDC42-203ENST00000400259 HIST1H1BP16401 226 aaKnown RBP12.56□□□□□ -0.4
CDC42-203ENST00000400259 TEX38Q6PEX7 206 aa12.56□□□□□ -0.4
CDC42-203ENST00000400259 SRSF12Q8WXF0 261 aaKnown RBP12.56□□□□□ -0.4
CDC42-203ENST00000400259 C22orf15Q8WYQ4 148 aa12.56□□□□□ -0.4
CDC42-203ENST00000400259 NCOR2Q9Y618 2525 aa12.56□□□□□ -0.4
CDC42-203ENST00000400259 CHD8Q9HCK8 2581 aa12.55□□□□□ -0.4
CDC42-203ENST00000400259 A0A1W2PPQ1 181 aa12.55□□□□□ -0.4
CDC42-203ENST00000400259 GGTLC3B5MD39 225 aa12.55□□□□□ -0.4
CDC42-203ENST00000400259 OR10D4PQ8NGN7 298 aa12.55□□□□□ -0.4
CDC42-203ENST00000400259 EAF1Q96JC9 268 aaPredicted RBP12.55□□□□□ -0.4
CDC42-203ENST00000400259 TNFRSF19Q9NS68 423 aa12.55□□□□□ -0.4
CDC42-203ENST00000400259 ZNF355PQ9NSJ1 428 aa12.55□□□□□ -0.4
CDC42-203ENST00000400259 GAR1Q9NY12 217 aaKnown RBP12.55□□□□□ -0.4
CDC42-203ENST00000400259 TSTD3H0UI37 97 aa12.55□□□□□ -0.4
CDC42-203ENST00000400259 IGHV3-48P01763 117 aa12.55□□□□□ -0.4
CDC42-203ENST00000400259 GPR6P46095 362 aaPredicted RBP12.55□□□□□ -0.4
CDC42-203ENST00000400259 NPBQ8NG41 125 aa12.55□□□□□ -0.4
CDC42-203ENST00000400259 OR5AU1Q8NGC0 362 aa12.55□□□□□ -0.4
CDC42-203ENST00000400259 SPTBN1Q01082 2364 aaKnown RBP12.55□□□□□ -0.4
CDC42-203ENST00000400259 K7EN84 100 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 NDUFA3O95167 84 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 OR10J4P0C629 311 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 NUTF2P61970 127 aaKnown RBP12.54□□□□□ -0.4
CDC42-203ENST00000400259 RUSC1-AS1Q66K80 236 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 TRAV5A0A0B4J249 113 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 FCN1O00602 326 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 HNF1AP20823 631 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 CRYBB3P26998 211 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 S100A2P29034 98 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 UBE2L3P68036 154 aaKnown RBP12.54□□□□□ -0.4
CDC42-203ENST00000400259 COTL1Q14019 142 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 OR10G8Q8NGN5 311 aa12.54□□□□□ -0.4
CDC42-203ENST00000400259 HELTA6NFD8 242 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 PAX1P15863 534 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 PLP1P60201 277 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 KLRD1Q13241 179 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 ACTL10Q5JWF8 245 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 OOSP1A8MZH6 123 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 NBR2O15453 112 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 MOSP00540 346 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 UQCRFS1P47985 274 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 MMDQ15546 238 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 C19orf35Q6ZS72 473 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 PAXXQ9BUH6 204 aa12.53□□□□□ -0.4
CDC42-203ENST00000400259 TRAV9-1A0A075B6T8 112 aa12.52□□□□□ -0.41
CDC42-203ENST00000400259 FABP4P15090 132 aa12.52□□□□□ -0.41
CDC42-203ENST00000400259 CDKN1AP38936 164 aa12.52□□□□□ -0.41
CDC42-203ENST00000400259 GNG4P50150 75 aa12.52□□□□□ -0.41
CDC42-203ENST00000400259 SUMO1P63165 101 aaKnown RBP12.52□□□□□ -0.41
CDC42-203ENST00000400259 PLGLAQ15195 96 aa12.52□□□□□ -0.41
CDC42-203ENST00000400259 CENPWQ5EE01 88 aa12.52□□□□□ -0.41
CDC42-203ENST00000400259 PERPQ96FX8 193 aa12.52□□□□□ -0.41
CDC42-203ENST00000400259 PITPNC1Q9UKF7 332 aa12.52□□□□□ -0.41
CDC42-203ENST00000400259 HILPDAQ9Y5L2 63 aa12.52□□□□□ -0.41
CDC42-203ENST00000400259 ITPR1Q14643 2758 aa12.52□□□□□ -0.41
CDC42-203ENST00000400259 APELAP0DMC3 54 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 GNLYP22749 145 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 EFNA4P52798 201 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 LINC00305Q7Z4B0 112 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 LHFPL4Q7Z7J7 247 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 STXBP6Q8NFX7 210 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 SGMS2Q8NHU3 365 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 FXYD5Q96DB9 178 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 UBTD1Q9HAC8 227 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 I3L2K1 104 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 COA6Q5JTJ3 125 aaKnown RBP12.51□□□□□ -0.41
CDC42-203ENST00000400259 MINOS1Q5TGZ0 78 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 CCDC144NLQ6NUI1 221 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 VMO1Q7Z5L0 202 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 MINOS1-NBL1R4GNA1 71 aa12.51□□□□□ -0.41
CDC42-203ENST00000400259 PYYP10082 97 aa12.5□□□□□ -0.41
CDC42-203ENST00000400259 ZFP36P26651 326 aaKnown RBP12.5□□□□□ -0.41
CDC42-203ENST00000400259 RPL15P61313 204 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms