RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 C1orf159Q96HA4 380 aa9.65□□□□□ -0.86
HLCS-202ENST00000399120 TIAF1O95411 115 aa9.65□□□□□ -0.86
HLCS-202ENST00000399120 SP7Q8TDD2 431 aaPredicted RBP9.65□□□□□ -0.86
HLCS-202ENST00000399120 RNF222A6NCQ9 220 aa9.65□□□□□ -0.86
HLCS-202ENST00000399120 ZNF114Q8NC26 417 aa9.65□□□□□ -0.86
HLCS-202ENST00000399120 CD5P06127 495 aa9.65□□□□□ -0.86
HLCS-202ENST00000399120 LHFPL4Q7Z7J7 247 aa9.65□□□□□ -0.86
HLCS-202ENST00000399120 SELENOKQ9Y6D0 94 aa9.65□□□□□ -0.86
HLCS-202ENST00000399120 SCN8AQ9UQD0 1980 aa9.65□□□□□ -0.87
HLCS-202ENST00000399120 RAMP3O60896 148 aa9.65□□□□□ -0.87
HLCS-202ENST00000399120 TEX38Q6PEX7 206 aa9.65□□□□□ -0.87
HLCS-202ENST00000399120 F5P12259 2224 aa9.65□□□□□ -0.87
HLCS-202ENST00000399120 TNFSF13O75888 250 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 SLC25A48Q6ZT89 311 aaKnown RBP9.64□□□□□ -0.87
HLCS-202ENST00000399120 HAPLN4Q86UW8 402 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HEATR5BQ9P2D3 2071 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 RP1P56715 2156 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 DMRTC2Q8IXT2 367 aaPredicted RBP9.64□□□□□ -0.87
HLCS-202ENST00000399120 LINC00527Q9UJ94 153 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 H3BMM0 161 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 LINC00271P0C7V0 271 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 FXYD7P58549 80 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 KLF17Q5JT82 389 aaPredicted RBP9.64□□□□□ -0.87
HLCS-202ENST00000399120 RASL11AQ6T310 242 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 ZNF497Q6ZNH5 498 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 TMEM190Q8WZ59 177 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 UBE2WQ96B02 151 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 DICER1Q9UPY3 1922 aaKnown RBP9.64□□□□□ -0.87
HLCS-202ENST00000399120 GUSBP1Q15486 140 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 SRSF7Q16629 238 aaKnown RBP eCLIP9.64□□□□□ -0.87
HLCS-202ENST00000399120 CRIM1Q9NZV1 1036 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST1H2BKO60814 126 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST1H2BJP06899 126 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST1H2BOP23527 126 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST1H2BBP33778 126 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST1H2BDP58876 126 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST1H2BCP62807 126 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST2H2BEQ16778 126 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.64□□□□□ -0.87
HLCS-202ENST00000399120 PRIMA1Q86XR5 153 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST1H2BHQ93079 126 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 SLC25A28Q96A46 364 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST1H2BNQ99877 126 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 HIST1H2BMQ99879 126 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 TAF1P21675 1872 aa9.64□□□□□ -0.87
HLCS-202ENST00000399120 PRB4P10163 310 aaPredicted RBP9.63□□□□□ -0.87
HLCS-202ENST00000399120 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 C9orf106Q8NAJ2 232 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 IGKV1D-43A0A0B4J1Z2 117 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 FAM90A9PA6NNJ1 464 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 SRRM4A7MD48 611 aaKnown RBP9.63□□□□□ -0.87
HLCS-202ENST00000399120 ANKRD31Q8N7Z5 1873 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 RPL15P61313 204 aaKnown RBP9.63□□□□□ -0.87
HLCS-202ENST00000399120 ACTL10Q5JWF8 245 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 ATRAIDQ6UW56 229 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 TIMM21Q9BVV7 248 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 CSTL1Q9H114 145 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 MBNL3Q9NUK0 354 aaKnown RBP9.63□□□□□ -0.87
HLCS-202ENST00000399120 TCRAP04437 139 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 FAM166AQ6J272 317 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 GTSF1LQ9H1H1 148 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 IGKV1D-13A0A0B4J2D9 117 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 PMS2P5A8MQ11 134 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 IGKV1-13P0DP09 117 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 LYZL1Q6UWQ5 148 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 COL22A1Q8NFW1 1626 aaPredicted RBP9.63□□□□□ -0.87
HLCS-202ENST00000399120 DSCR9P59020 149 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 CSRP2Q16527 193 aa9.63□□□□□ -0.87
HLCS-202ENST00000399120 SOCS3O14543 225 aa9.62□□□□□ -0.87
HLCS-202ENST00000399120 TNFRSF14Q92956 283 aa9.62□□□□□ -0.87
HLCS-202ENST00000399120 C1QTNF4Q9BXJ3 329 aa9.62□□□□□ -0.87
HLCS-202ENST00000399120 MDC1Q14676 2089 aaKnown RBP9.62□□□□□ -0.87
HLCS-202ENST00000399120 SPINK8P0C7L1 97 aa9.62□□□□□ -0.87
HLCS-202ENST00000399120 ZNF138P52744 262 aa9.62□□□□□ -0.87
HLCS-202ENST00000399120 SCRT1Q9BWW7 348 aa9.62□□□□□ -0.87
HLCS-202ENST00000399120 C15orf32Q32M92 178 aa9.62□□□□□ -0.87
HLCS-202ENST00000399120 RPRMLQ8N4K4 120 aa9.62□□□□□ -0.87
HLCS-202ENST00000399120 CD5LO43866 347 aa9.62□□□□□ -0.87
HLCS-202ENST00000399120 IGFBP3P17936 291 aaPredicted RBP9.62□□□□□ -0.87
HLCS-202ENST00000399120 HIST1H2BLQ99880 126 aa9.62□□□□□ -0.87
HLCS-202ENST00000399120 USP54Q70EL1 1684 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 A0A0G2JMM0 328 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 LOC105371267A0A1B0GV96 52 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 A0A1W2PPB8 328 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 KIR3DP1A8MWS1 328 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 C9JAW5 83 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 LYNX1G3V0Z9 82 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 LYNX1P0DP58 116 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 RNF126Q9BV68 326 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 PAPPAQ13219 1627 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 UBE2CO00762 179 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 CT83Q5H943 113 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 EXOC3-AS1Q8N2X6 119 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 OR10W1Q8NGF6 305 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 SLC25A39Q9BZJ4 359 aaPredicted RBP9.61□□□□□ -0.87
HLCS-202ENST00000399120 MAP1BP46821 2468 aaKnown RBP9.61□□□□□ -0.87
HLCS-202ENST00000399120 OTOFQ9HC10 1997 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 ZNF124Q15973 351 aa9.61□□□□□ -0.87
HLCS-202ENST00000399120 A0A087X0K7 114 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms