RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 C1orf162Q8NEQ5 155 aaPredicted RBP8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 TNRC6AQ8NDV7 1962 aaKnown RBP8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 PPIAL4DF5H284 164 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 K7ESF4 209 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 SAP30O75446 220 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 WISP2O76076 250 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 SAA2P0DJI9 122 aaPredicted RBP8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 C8orf88P0DMB2 117 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 ORM2P19652 201 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 IGHV1-2P23083 117 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 FOXE3Q13461 319 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 SPRNQ5BIV9 151 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 TMEM116Q8NCL8 245 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 CXXC4Q9H2H0 198 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 HES4Q9HCC6 221 aa8.05□□□□□ -1.12
PTCHD4-202ENST00000398738 VWC2LB2RUY7 222 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 H0YJW9 148 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 ZNF561-AS1K7EIQ3 104 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 K7EP13 123 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 TAX1BP3O14907 124 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 SSPNQ14714 243 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 SLC25A34Q6PIV7 304 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 IFI27L2Q9H2X8 130 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 ADAMTS20P59510 1910 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 SPRY3O43610 288 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 COX7A2P2O60397 106 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 CT45A1Q5HYN5 189 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 CT45A3Q8NHU0 189 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 FNDC4Q9H6D8 234 aaPredicted RBP8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 IDI2-AS1Q9NZ38 188 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 LY96Q9Y6Y9 160 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 DMXL2Q8TDJ6 3036 aa8.04□□□□□ -1.12
PTCHD4-202ENST00000398738 TANC2Q9HCD6 1990 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 TRAV30A0A087WSZ9 112 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 FAM90A27PA6NNH2 459 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 IQCF6A8MYZ5 107 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 SLC25A5P05141 298 aaKnown RBP8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 REG1AP05451 166 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 TMPRSS3P57727 454 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 PSG9Q00887 426 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 SLC25A33Q9BSK2 321 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 CHODLQ9H9P2 273 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 IGKV1D-17A0A075B6S4 117 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 SRRM4A7MD48 611 aaKnown RBP8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 C10orf55Q5SWW7 151 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 MOGAT3Q86VF5 341 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 WDR31Q8NA23 367 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 OR2V2Q96R30 315 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 PAXXQ9BUH6 204 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 MEGF9Q9H1U4 602 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 TRAV8-6A0A0B4J262 113 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 GAGE12BA1L429 117 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 MMP23AO75900 390 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 FXYD7P58549 80 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 BVES-AS1Q5T3Y7 98 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 SMIM15Q7Z3B0 74 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 NPIPB3Q92617 1050 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 CORO2AQ92828 525 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 RAB37Q96AX2 223 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 IGF2BP2-AS1Q96M15 143 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 CALYQ9NYX4 217 aa8.03□□□□□ -1.12
PTCHD4-202ENST00000398738 PGPA6NDG6 321 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 COX19Q49B96 90 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 PNKDQ8N490 385 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 RBMXL3Q8N7X1 1067 aaKnown RBP8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 URB1-AS1Q96HZ7 61 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 ZMAT4Q9H898 229 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 ZNF835Q9Y2P0 537 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 RAXQ9Y2V3 346 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 HILPDAQ9Y5L2 63 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 SYS1-DBNDD2H3BUS1 97 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 PEX7O00628 323 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 LRRC10Q5BKY1 277 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 TEX45Q8NA69 505 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 SVIPQ8NHG7 77 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 FLYWCH2Q96CP2 140 aaKnown RBP8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 MRPL27Q9P0M9 148 aaKnown RBP8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 SPRR3Q9UBC9 169 aa8.02□□□□□ -1.13
PTCHD4-202ENST00000398738 TRAV8-1A0A0A6YYK1 113 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 TRGV5A0A0B4J1U4 118 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 IGHV1-24A0A0C4DH33 117 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 A0A1W2PRE2 83 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 CHEK1O14757 476 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 KLK10O43240 276 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 MOSP00540 346 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 CYC1P08574 325 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 LINC00322Q6ZN03 302 aaPredicted RBP8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 SARAFQ96BY9 339 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 CHRDL1Q9BU40 450 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 CEP192Q8TEP8 1941 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 TNFSF15O95150 251 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 LOXL3P58215 753 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 AARDQ4LEZ3 155 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 OR1B1Q8NGR6 318 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 SLC25A10Q9UBX3 287 aaPredicted RBP8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 PILRBQ9UKJ0 227 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 CNOT1A5YKK6 2376 aaKnown RBP8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 GOSR1O95249 250 aa8.01□□□□□ -1.13
PTCHD4-202ENST00000398738 CECR9P0C854 216 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms