RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 FAM53AQ6NSI3 398 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA11-201ENST00000398587 TMEM136Q6ZRR5 245 aa11.68□□□□□ -0.54
PCDHGA11-201ENST00000398587 A0A1B0GW15 77 aa11.68□□□□□ -0.54
PCDHGA11-201ENST00000398587 RHOGP84095 191 aa11.68□□□□□ -0.54
PCDHGA11-201ENST00000398587 TMEM242Q9NWH2 141 aa11.68□□□□□ -0.54
PCDHGA11-201ENST00000398587 NUDT3O95989 172 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 RNF224P0DH78 156 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 CEACAM8P31997 349 aaPredicted RBP11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 RPL13AP40429 203 aaKnown RBP11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 RNASE7Q9H1E1 156 aaKnown RBP11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 ZNF503-AS2A6NEH8 195 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 DKK1O94907 266 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 TPTE2P1Q5T6R2 138 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 MINOS1Q5TGZ0 78 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 LEMD1Q68G75 181 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 DUX5Q96PT3 197 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 SLC50A1Q9BRV3 221 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 MINOS1-NBL1R4GNA1 71 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 C15orf62A8K5M9 175 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 Q6ZR03 302 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 RPRMLQ8N4K4 120 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 TRBV20OR9-2A0A075B6H5 130 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 GATA4P43694 442 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 ERVK11-1P61568 191 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 GNG5P63218 68 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 TEX38Q6PEX7 206 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 C8orf46Q8TAG6 207 aa11.67□□□□□ -0.54
PCDHGA11-201ENST00000398587 E7EQL1 145 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 LINC00205P59089 165 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 MGST2Q99735 147 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 LTBP2Q14767 1821 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 PGPEP1LA6NFU8 196 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 IGHV3-11P01762 117 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 FAM71F2Q6NXP2 309 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 ZNF502Q8TBZ5 544 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 TMEM170AQ8WVE7 144 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 RFNGQ9Y644 331 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 KIF26AQ9ULI4 1882 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 TECTAO75443 2155 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 TRBV24-1A0A075B6N3 115 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 LOC105371267A0A1B0GV96 52 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 MALRD1Q5VYJ5 2156 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 M0R1W7 72 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 HAX1O00165 279 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 WNT2P09544 360 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 SAMD13Q5VXD3 122 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 UNQ6494/PRO21346Q6UXR6 183 aa11.66□□□□□ -0.54
PCDHGA11-201ENST00000398587 SLC25A34Q6PIV7 304 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 C12orf54Q6X4T0 127 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 VMO1Q7Z5L0 202 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 PRELID3AQ96N28 172 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 PARD6GQ9BYG4 376 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 NCOR1P1Q9H4R4 102 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 OR4C46A6NHA9 309 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 IGLV1-44P01699 117 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 LYPD2Q6UXB3 125 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 NPFFR1Q9GZQ6 430 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 AGMATQ9BSE5 352 aa11.65□□□□□ -0.54
PCDHGA11-201ENST00000398587 WDR86Q86TI4 376 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 CBY1Q9Y3M2 126 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 TRAV40A0A0B4J280 105 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 COLCA2A8K830 154 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 FABP5P3A8MUU1 101 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 IGKV3-20P01619 116 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 NEUROG1Q92886 237 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 SEPSECSQ9HD40 501 aaKnown RBP11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 C2orf16Q68DN1 1984 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 A0A1B0GWJ7 208 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 BUB1B-PAK6H3BSN5 160 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 FER1L6-AS1Q8NA97 138 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 TMEM190Q8WZ59 177 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 TRGV9Q99603 122 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 LIME1Q9H400 295 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 PSG8Q9UQ74 426 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 FAM208BQ5VWN6 2430 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 IGHV3OR16-12A0A075B7B8 117 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 TRAV5A0A0B4J249 113 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 CFHR2P36980 270 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 ASIPP42127 132 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 RRN3P1Q2M238 152 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 Q8TCH9 128 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 KIR2DL4Q99706 377 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 ASCL2Q99929 193 aa11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 TBL2Q9Y4P3 447 aaKnown RBP11.64□□□□□ -0.55
PCDHGA11-201ENST00000398587 SMAD7O15105 426 aaKnown RBP11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 COL8A2P25067 703 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 C5orf64Q2M2E5 130 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 TMEM155Q4W5P6 130 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 SPATA31B1PQ5VZV4 182 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 SIGLEC9Q9Y336 463 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 M0R3E3 92 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 HIST1H2BKO60814 126 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 HIST1H2BJP06899 126 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 GNLYP22749 145 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 HIST1H2BOP23527 126 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 HIST1H2BBP33778 126 aa11.63□□□□□ -0.55
PCDHGA11-201ENST00000398587 TCTAP57738 103 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms