RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 COL10A1Q03692 680 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 TSPO2Q5TGU0 170 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 ANKRD37Q7Z713 158 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 GCSAMQ8N6F7 178 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 ZNF799Q96GE5 643 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 DEFB126Q9BYW3 111 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 IGKV1-9A0A0C4DH69 117 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 RAMP1O60894 148 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 LILRA1O75019 489 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 MT-ATP8P03928 68 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 BCL3P20749 454 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 GLIPR1P48060 266 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 SLC38A11Q08AI6 406 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 FAM27E3Q08E93 113 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 PIP4P1Q86T03 277 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 TVP23CQ96ET8 276 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 BORCS8Q96FH0 119 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 RPRMQ9NS64 109 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 LSM4Q9Y4Z0 139 aaKnown RBP5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 LINC00312Q9Y6C7 94 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 BAHCC1Q9P281 2608 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 MYO7BQ6PIF6 2116 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 ZNF469Q96JG9 3925 aaPredicted RBP5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 PHF3Q92576 2039 aaKnown RBP5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 IGHV1OR15-9A0A0B4J2B8 117 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 GATA1P15976 413 aaPredicted RBP5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 YPEL3P61236 119 aaPredicted RBP5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 FOXC1Q12948 553 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 Q6ZS52 159 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 APCDD1LQ8NCL9 501 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 TMEM170AQ8WVE7 144 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 DDB2Q92466 427 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 LIN37Q96GY3 246 aaPredicted RBP5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 MRPL32Q9BYC8 188 aaKnown RBP5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 JPT2Q9H910 190 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 ST20Q9HBF5 79 aa5.42□□□□□ -1.54
TM9SF4-202ENST00000398022 IGLV3-32A0A0A0MS00 114 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 VWC2LB2RUY7 222 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 CA2P00918 260 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 Q96M66 194 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 KIR2DL4Q99706 377 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 ARRDC1-AS1Q9H2J1 176 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 MDFICQ9P1T7 246 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 ASCC3Q8N3C0 2202 aaKnown RBP5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 APC2O95996 2303 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 PIGBOS1A0A0B4J2F0 54 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 CRYBB3P26998 211 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 RND2P52198 227 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 HILS1P60008 231 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 PHLDA2Q53GA4 152 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 DPPA3Q6W0C5 159 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 SSC4DQ8WTU2 575 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 ZNF501Q96CX3 271 aaPredicted RBP5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 RARRES3Q9UL19 164 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 GPR183P32249 361 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 OPRM1P35372 400 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 TMEM187Q14656 261 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 BVES-AS1Q5T3Y7 98 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 Q6Q795 121 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 TMEM54Q969K7 222 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 LINC01587Q99440 93 aa5.41□□□□□ -1.54
TM9SF4-202ENST00000398022 C9orf118A6NHY6 69 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 C15orf61A6NNL5 157 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 C9JQL5 133 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 SPRY2O43597 315 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 HBE1P02100 147 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 HES1Q14469 280 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 SP6Q3SY56 376 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 ZNF672Q499Z4 452 aaPredicted RBP5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 LCN15Q6UWW0 184 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 TGIF2LYQ8IUE0 185 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 LRTM2Q8N967 370 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 SSBP3Q9BWW4 388 aaPredicted RBP5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 TMEM242Q9NWH2 141 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 NCOA6Q14686 2063 aaPredicted RBP5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 KLF7O75840 302 aaPredicted RBP5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 DIAPH2-AS1Q14236 149 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 C10orf128Q5T292 105 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 SLC25A48Q6ZT89 311 aaKnown RBP5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 LYZL2Q7Z4W2 148 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 ZFP62Q8NB50 900 aaPredicted RBP5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 ARPC1AQ92747 370 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 PLEKHB2Q96CS7 222 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 GNPNAT1Q96EK6 184 aaPredicted RBP5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 ZNF442Q9H7R0 627 aa5.4□□□□□ -1.54
TM9SF4-202ENST00000398022 IGLV3-12A0A075B6K2 115 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 ZNF727A8MUV8 499 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 CXorf1O96002 111 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 DLX1P56177 255 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 SEC11AP67812 179 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 ATP5G2Q06055 141 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 ZNF880Q6PDB4 577 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 OR4F17Q8NGA8 305 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 OSR1Q8TAX0 266 aaPredicted RBP5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 C9orf85Q96MD7 179 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 OR4F4Q96R69 305 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 VKORC1Q9BQB6 163 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 HDHD3Q9BSH5 251 aaPredicted RBP5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 PARLQ9H300 379 aa5.4□□□□□ -1.55
TM9SF4-202ENST00000398022 TMEM178BH3BS89 294 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms