RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SLC17A3O00476 420 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 LDLRAD2Q5SZI1 272 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 Q6ZN92 141 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ST6GALNAC6Q969X2 333 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 UHRF2Q96PU4 802 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TPSG1Q9NRR2 321 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 MALRD1Q5VYJ5 2156 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 LYNX1G3V0Z9 82 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 PLAUP00749 431 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 LYNX1P0DP58 116 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 USF1P22415 310 aaPredicted RBP14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 CRYBB3P26998 211 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 FOXL1Q12952 345 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 OR10G8Q8NGN5 311 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TMEM186Q96B77 213 aa14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ZNF430Q9H8G1 570 aaPredicted RBP14.82□□□□□ -0.04
CHRFAM7A-202ENST00000397827 IGHV2-70DA0A0C4DH43 119 aa14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 HINT1P49773 126 aaPredicted RBP14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 HNRNPA3P51991 378 aaKnown RBP14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 MORN5Q5VZ52 161 aa14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TECRQ9NZ01 308 aaKnown RBP14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 DLL1O00548 723 aa14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 SLC25A17O43808 307 aa14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 IGLV2-23P01705 113 aa14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 DLX6P56179 175 aa14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 RPL15P61313 204 aaKnown RBP14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 PDPNQ86YL7 162 aa14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TMEM167AQ8TBQ9 72 aa14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 C11orf52Q96A22 123 aa14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 NGBQ9NPG2 151 aa14.81□□□□□ -0.04
CHRFAM7A-202ENST00000397827 LOC102724200A0A096LPH7 203 aaPredicted RBP14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 IGHV1-69-2A0A0G2JMI3 117 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 REG1AP05451 166 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 FNDC4Q9H6D8 234 aaPredicted RBP14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 WASHC3Q9Y3C0 194 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 IGF2RP11717 2491 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ZZEF1O43149 2961 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TRAV5A0A0B4J249 113 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 K7ENP7 123 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ENSAO43768 121 aaKnown RBP14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TMEM155Q4W5P6 130 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 SPATA45Q537H7 98 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 OR2D3Q8NGH3 330 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 EAF1Q96JC9 268 aaPredicted RBP14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TMEM167BQ9NRX6 74 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 UQCR10Q9UDW1 63 aa14.8□□□□□ -0.04
CHRFAM7A-202ENST00000397827 IGHV1-8P0DP01 117 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 AREGP15514 252 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ATP5IP56385 69 aaPredicted RBP14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 LINC01560Q8TB33 94 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 RNF2Q99496 336 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 COMPP49747 757 aaPredicted RBP14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 PAFAH1B2P68402 229 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 OCIAD2Q56VL3 154 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 LINC00311Q8N616 119 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 OR4B1Q8NGF8 309 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ANKHD1Q8IWZ3 2542 aaKnown RBP14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 GGTLC3B5MD39 225 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 VSTM2AQ8TAG5 236 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 SLC25A33Q9BSK2 321 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 KAAG1Q9UBP8 84 aa14.79□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ABCA1O95477 2261 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 APOBEC3AP31941 199 aaPredicted RBP14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 SUMO1P63165 101 aaKnown RBP14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 CENPWQ5EE01 88 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 PQLC2Q6ZP29 291 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ZNF596Q8TC21 504 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 CACNG8Q8WXS5 425 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 NPIPB3Q92617 1050 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 BTF3L4Q96K17 158 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 CST9LQ9H4G1 147 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 HELTA6NFD8 242 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 C9JCJ5 164 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 APELAP0DMC3 54 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ZNF90Q03938 601 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 RBPJQ06330 500 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 SSX8Q7RTT4 187 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 OR5AU1Q8NGC0 362 aa14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 MRPL36Q9P0J6 103 aaKnown RBP14.78□□□□□ -0.04
CHRFAM7A-202ENST00000397827 HYPMO75409 117 aa14.77□□□□□ -0.04
CHRFAM7A-202ENST00000397827 ADMP35318 185 aa14.77□□□□□ -0.04
CHRFAM7A-202ENST00000397827 KRTDAPP60985 99 aa14.77□□□□□ -0.04
CHRFAM7A-202ENST00000397827 TP53TG3Q9ULZ0 132 aa14.77□□□□□ -0.04
CHRFAM7A-202ENST00000397827 C8orf88P0DMB2 117 aa14.77□□□□□ -0.05
CHRFAM7A-202ENST00000397827 GRNP28799 593 aaKnown RBP14.77□□□□□ -0.05
CHRFAM7A-202ENST00000397827 GNG4P50150 75 aa14.77□□□□□ -0.05
CHRFAM7A-202ENST00000397827 TAS2R45P59539 299 aa14.77□□□□□ -0.05
CHRFAM7A-202ENST00000397827 VAMP3Q15836 100 aa14.77□□□□□ -0.05
CHRFAM7A-202ENST00000397827 ERASQ7Z444 233 aa14.77□□□□□ -0.05
CHRFAM7A-202ENST00000397827 SAMD10Q9BYL1 202 aa14.77□□□□□ -0.05
CHRFAM7A-202ENST00000397827 A0A1W2PPI3 338 aa14.76□□□□□ -0.05
CHRFAM7A-202ENST00000397827 PSMB11A5LHX3 300 aa14.76□□□□□ -0.05
CHRFAM7A-202ENST00000397827 SERF1AO75920 110 aa14.76□□□□□ -0.05
CHRFAM7A-202ENST00000397827 CD3EP07766 207 aa14.76□□□□□ -0.05
CHRFAM7A-202ENST00000397827 FAM71F2Q6NXP2 309 aa14.76□□□□□ -0.05
CHRFAM7A-202ENST00000397827 C8orf31Q8N9H6 132 aa14.76□□□□□ -0.05
CHRFAM7A-202ENST00000397827 VKORC1Q9BQB6 163 aa14.76□□□□□ -0.05
CHRFAM7A-202ENST00000397827 TMEM133Q9H2Q1 129 aa14.76□□□□□ -0.05
CHRFAM7A-202ENST00000397827 ATRXP46100 2492 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms