RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 RNF212Q495C1 297 aa11.81□□□□□ -0.52
CAPN3-207ENST00000397200 STPG3Q8N7X2 389 aa11.81□□□□□ -0.52
CAPN3-207ENST00000397200 CACNG8Q8WXS5 425 aa11.81□□□□□ -0.52
CAPN3-207ENST00000397200 RBM14Q96PK6 669 aaKnown RBP11.81□□□□□ -0.52
CAPN3-207ENST00000397200 SLC25A33Q9BSK2 321 aa11.81□□□□□ -0.52
CAPN3-207ENST00000397200 VPREB3Q9UKI3 123 aa11.81□□□□□ -0.52
CAPN3-207ENST00000397200 NCBP2LA6PVI3 153 aaKnown RBP11.8□□□□□ -0.52
CAPN3-207ENST00000397200 SLC25A17O43808 307 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 MT-ND4LP03901 98 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 LINC00869P0C866 280 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 B2MP61769 119 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 PLGLAQ15195 96 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 PSG5Q15238 335 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 AKIRIN2Q53H80 203 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 TMEM86BQ8N661 226 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 ZNF114Q8NC26 417 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 NPBQ8NG41 125 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 RNASEH2CQ8TDP1 164 aaKnown RBP11.8□□□□□ -0.52
CAPN3-207ENST00000397200 TPSG1Q9NRR2 321 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 METTL1Q9UBP6 276 aaKnown RBP11.8□□□□□ -0.52
CAPN3-207ENST00000397200 SLC45A2Q9UMX9 530 aa11.8□□□□□ -0.52
CAPN3-207ENST00000397200 FN1P02751 2386 aaKnown RBP11.79□□□□□ -0.52
CAPN3-207ENST00000397200 IGKV1OR2-108A0A075B7D4 117 aa11.79□□□□□ -0.52
CAPN3-207ENST00000397200 CEBPGP53567 150 aa11.79□□□□□ -0.52
CAPN3-207ENST00000397200 CYP2G1PQ6ZSU1 146 aa11.79□□□□□ -0.52
CAPN3-207ENST00000397200 C16orf82Q7Z2V1 217 aa11.79□□□□□ -0.52
CAPN3-207ENST00000397200 MMD2Q8IY49 270 aa11.79□□□□□ -0.52
CAPN3-207ENST00000397200 SLC35E1Q96K37 410 aa11.79□□□□□ -0.52
CAPN3-207ENST00000397200 SDF2L1Q9HCN8 221 aa11.79□□□□□ -0.52
CAPN3-207ENST00000397200 MOB4Q9Y3A3 225 aa11.79□□□□□ -0.52
CAPN3-207ENST00000397200 A0A1W2PPV4 95 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 CXorf65A6NEN9 183 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 DNAJC9-AS1A6NH13 148 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 NDUFA3O95167 84 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 CRYBA1P05813 215 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 GAMTQ14353 236 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 PRSS8Q16651 343 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 SLC16A13Q7RTY0 426 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 GATAD1Q8WUU5 269 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 DUX5Q96PT3 197 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 FBXL15Q9H469 300 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 CXorf1O96002 111 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 RHOBP62745 196 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 JMJD8Q96S16 334 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 RASL11BQ9BPW5 248 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 TXNDC17Q9BRA2 123 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 TMEM242Q9NWH2 141 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 SIGLEC9Q9Y336 463 aa11.78□□□□□ -0.52
CAPN3-207ENST00000397200 IGLC7A0M8Q6 106 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 M0QZK8 103 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 PAGE4O60829 102 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 OR2C1O95371 312 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 ARL14EPLP0DKL9 152 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 HILS1P60008 231 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 C5orf64Q2M2E5 130 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 Q8N9W7 124 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 ABHD5Q8WTS1 349 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 ISOC2Q96AB3 205 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 ESM1Q9NQ30 184 aa11.77□□□□□ -0.53
CAPN3-207ENST00000397200 ZNF727A8MUV8 499 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 CLDN34H7C241 214 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 COMPP49747 757 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-207ENST00000397200 SUB1P53999 127 aaKnown RBP eCLIP11.76□□□□□ -0.53
CAPN3-207ENST00000397200 PPP1R27Q86WC6 154 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 MRPL41Q8IXM3 137 aaKnown RBP11.76□□□□□ -0.53
CAPN3-207ENST00000397200 C5orf56Q8N8D9 126 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 THAP8Q8NA92 274 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 SMIM7Q9BQ49 75 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 C19orf24Q9BVV8 132 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 PARLQ9H300 379 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 MLXQ9UH92 298 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 NAT8Q9UHE5 227 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
CAPN3-207ENST00000397200 PDE6DO43924 150 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 OR5G3P0C626 314 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 RPL27AP46776 148 aaKnown RBP11.75□□□□□ -0.53
CAPN3-207ENST00000397200 SSBP2P81877 361 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-207ENST00000397200 OR4F5Q8NH21 305 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 OR4F4Q96R69 305 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 FNDC4Q9H6D8 234 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-207ENST00000397200 SEPSECSQ9HD40 501 aaKnown RBP11.75□□□□□ -0.53
CAPN3-207ENST00000397200 PSMB11A5LHX3 300 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 C11orf94C9JXX5 98 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 F6UZH7 168 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 TCF21O43680 179 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 CRYGCP07315 174 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 CTRB1P17538 263 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 RAB5AP20339 215 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 GCHFRP30047 84 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 OR10J1P30954 320 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 RND2P52198 227 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 CTRB2Q6GPI1 263 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 FAM24BQ8N5W8 94 aa11.75□□□□□ -0.53
CAPN3-207ENST00000397200 TEX22C9J3V5 150 aa11.74□□□□□ -0.53
CAPN3-207ENST00000397200 ACTL6BO94805 426 aa11.74□□□□□ -0.53
CAPN3-207ENST00000397200 NPPCP23582 126 aa11.74□□□□□ -0.53
CAPN3-207ENST00000397200 MLANAQ16655 118 aa11.74□□□□□ -0.53
CAPN3-207ENST00000397200 SPATA31B1PQ5VZV4 182 aa11.74□□□□□ -0.53
CAPN3-207ENST00000397200 IQCF2Q8IXL9 164 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms