RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 C9JCJ5 164 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 PPP1R2P9O14990 202 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 IGHV4-39P01824 125 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 PFN1P07737 140 aaKnown RBP11.89□□□□□ -0.51
CBX3-202ENST00000396386 CD24P25063 80 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 RUSC1-AS1Q66K80 236 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 PATE2Q6UY27 113 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 PERPQ96FX8 193 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 DMRT1Q9Y5R6 373 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 TRAV5A0A0B4J249 113 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 A0A1W2PRE2 83 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 UBE2CO00762 179 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 SRP14P37108 136 aaKnown RBP11.89□□□□□ -0.51
CBX3-202ENST00000396386 RPL35P42766 123 aaKnown RBP11.89□□□□□ -0.51
CBX3-202ENST00000396386 FXYD3Q14802 87 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 OR1L6Q8NGR2 347 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 ELOVL1Q9BW60 279 aa11.89□□□□□ -0.51
CBX3-202ENST00000396386 PGPEP1LA6NFU8 196 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 I3L2K1 104 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 AP4M1O00189 453 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 FBLN7Q53RD9 439 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 Q8N6K4 173 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 TBX15Q96SF7 602 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 CCL19Q99731 98 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 PYGO2Q9BRQ0 406 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 PAXXQ9BUH6 204 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 WNT10AQ9GZT5 417 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 AURKAIP1Q9NWT8 199 aaPredicted RBP11.88□□□□□ -0.51
CBX3-202ENST00000396386 LY96Q9Y6Y9 160 aa11.88□□□□□ -0.51
CBX3-202ENST00000396386 DCHS2Q6V1P9 2916 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 UBE2E1P51965 193 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 EBI3Q14213 229 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 KCNIP4Q6PIL6 250 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 LINC00305Q7Z4B0 112 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 OR1B1Q8NGR6 318 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 MYO18BQ8IUG5 2567 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 TMEM11P17152 192 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 ORM2P19652 201 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 FABP9Q0Z7S8 132 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 OR51M1Q9H341 326 aa11.87□□□□□ -0.51
CBX3-202ENST00000396386 TRGC2P03986 189 aa11.86□□□□□ -0.51
CBX3-202ENST00000396386 IGLC1P0CG04 106 aa11.86□□□□□ -0.51
CBX3-202ENST00000396386 PYYP10082 97 aa11.86□□□□□ -0.51
CBX3-202ENST00000396386 CRYBB3P26998 211 aa11.86□□□□□ -0.51
CBX3-202ENST00000396386 PLP1P60201 277 aa11.86□□□□□ -0.51
CBX3-202ENST00000396386 STXBP6Q8NFX7 210 aa11.86□□□□□ -0.51
CBX3-202ENST00000396386 ARPC1AQ92747 370 aa11.86□□□□□ -0.51
CBX3-202ENST00000396386 PIMREGQ9BSJ6 248 aa11.86□□□□□ -0.51
CBX3-202ENST00000396386 SRD5A3Q9H8P0 318 aa11.86□□□□□ -0.51
CBX3-202ENST00000396386 MAST4O15021 2626 aa11.86□□□□□ -0.51
CBX3-202ENST00000396386 A0A1W2PPQ1 181 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 NCBP2LA6PVI3 153 aaKnown RBP11.85□□□□□ -0.51
CBX3-202ENST00000396386 GGCTO75223 188 aaKnown RBP11.85□□□□□ -0.51
CBX3-202ENST00000396386 HYPMO75409 117 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 HNF1AP20823 631 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 CENPWQ5EE01 88 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 LINC00518Q8N0U6 118 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 OCC1Q8TAD7 63 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 IMMP2LQ96T52 175 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 FAM103A1Q9BTL3 118 aaKnown RBP11.85□□□□□ -0.51
CBX3-202ENST00000396386 LPAR2Q9HBW0 351 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 NPIPB5A8MRT5 1133 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 PPP5D1E7EU14 171 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 FABP1P07148 127 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 GNG4P50150 75 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 SUMO1P63165 101 aaKnown RBP11.85□□□□□ -0.51
CBX3-202ENST00000396386 TEX38Q6PEX7 206 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 ZNF562Q6V9R5 426 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 ZNF843Q8N446 348 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 FXYD5Q96DB9 178 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 RASL11BQ9BPW5 248 aa11.85□□□□□ -0.51
CBX3-202ENST00000396386 GSX1Q9H4S2 264 aaPredicted RBP11.85□□□□□ -0.51
CBX3-202ENST00000396386 HELTA6NFD8 242 aa11.84□□□□□ -0.51
CBX3-202ENST00000396386 K7EIM0 57 aa11.84□□□□□ -0.51
CBX3-202ENST00000396386 SAA4P35542 130 aa11.84□□□□□ -0.51
CBX3-202ENST00000396386 CX3CL1P78423 397 aa11.84□□□□□ -0.51
CBX3-202ENST00000396386 OR10G8Q8NGN5 311 aa11.84□□□□□ -0.51
CBX3-202ENST00000396386 FAM168AQ92567 244 aa11.84□□□□□ -0.51
CBX3-202ENST00000396386 BTF3L4Q96K17 158 aa11.84□□□□□ -0.51
CBX3-202ENST00000396386 RBM14Q96PK6 669 aaKnown RBP11.84□□□□□ -0.51
CBX3-202ENST00000396386 POLR3KQ9Y2Y1 108 aaPredicted RBP11.84□□□□□ -0.51
CBX3-202ENST00000396386 K7EN84 100 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 HIST1H2BKO60814 126 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 HIST1H2BJP06899 126 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 PLA2G2AP14555 144 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 HIST1H2BOP23527 126 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 BRS3P32247 399 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 HIST1H2BBP33778 126 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 HIST1H2BDP58876 126 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 LYZP61626 148 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 HIST1H2BCP62807 126 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 HIST2H2BEQ16778 126 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 TIGITQ495A1 244 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.83□□□□□ -0.52
CBX3-202ENST00000396386 HIST1H2BHQ93079 126 aa11.83□□□□□ -0.52
CBX3-202ENST00000396386 HIST1H2BNQ99877 126 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms