RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 GSX1Q9H4S2 264 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-202ENST00000394888 HELTA6NFD8 242 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 SUMO1P63165 101 aaKnown RBP12.24□□□□□ -0.45
CPSF7-202ENST00000394888 TMEM136Q6ZRR5 245 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 LURAP1LQ8IV03 231 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 OR5AU1Q8NGC0 362 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 TNFRSF14Q92956 283 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 MSRB2Q9Y3D2 182 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 ATRXP46100 2492 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 CASP6P55212 293 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 VSTM2AQ8TAG5 236 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 OR7C2O60412 319 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 MOSP00540 346 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 RBP4P02753 201 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 CX3CL1P78423 397 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 FXYD3Q14802 87 aa12.24□□□□□ -0.45
CPSF7-202ENST00000394888 COL25A1Q9BXS0 654 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-202ENST00000394888 ANKHD1Q8IWZ3 2542 aaKnown RBP12.23□□□□□ -0.45
CPSF7-202ENST00000394888 I3L2K1 104 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 ISLRO14498 428 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 ERHP84090 104 aaKnown RBP12.23□□□□□ -0.45
CPSF7-202ENST00000394888 LINC00322Q6ZN03 302 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-202ENST00000394888 Q8N976 141 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 DYNLRB1Q9NP97 96 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 OSTCQ9NRP0 149 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 APELAP0DMC3 54 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 MC5RP33032 325 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 MUC15Q8N387 334 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 CDC42EP3Q9UKI2 254 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 CD3EP07766 207 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 LGALS7P47929 136 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 NHLRC2Q8NBF2 726 aa12.23□□□□□ -0.45
CPSF7-202ENST00000394888 CA1P00915 261 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-202ENST00000394888 PLP1P60201 277 aa12.22□□□□□ -0.45
CPSF7-202ENST00000394888 Q6ZWC4 215 aa12.22□□□□□ -0.45
CPSF7-202ENST00000394888 A8MWP6 167 aa12.22□□□□□ -0.45
CPSF7-202ENST00000394888 GNG4P50150 75 aa12.22□□□□□ -0.45
CPSF7-202ENST00000394888 OR8I2Q8N0Y5 310 aa12.22□□□□□ -0.45
CPSF7-202ENST00000394888 MLST8Q9BVC4 326 aa12.22□□□□□ -0.45
CPSF7-202ENST00000394888 PRO1933Q9H354 126 aa12.22□□□□□ -0.45
CPSF7-202ENST00000394888 KLF12Q9Y4X4 402 aa12.22□□□□□ -0.45
CPSF7-202ENST00000394888 TRGV9Q99603 122 aa12.22□□□□□ -0.45
CPSF7-202ENST00000394888 MRPL18Q9H0U6 180 aaKnown RBP12.22□□□□□ -0.45
CPSF7-202ENST00000394888 ODF3BA8MYP8 253 aa12.21□□□□□ -0.45
CPSF7-202ENST00000394888 SNRPCP09234 159 aaKnown RBP12.21□□□□□ -0.45
CPSF7-202ENST00000394888 LINC00305Q7Z4B0 112 aa12.21□□□□□ -0.45
CPSF7-202ENST00000394888 MT-CO2P00403 227 aa12.21□□□□□ -0.46
CPSF7-202ENST00000394888 CD33P20138 364 aa12.21□□□□□ -0.46
CPSF7-202ENST00000394888 GNG5P63218 68 aa12.21□□□□□ -0.46
CPSF7-202ENST00000394888 C10orf113Q5VZT2 155 aa12.21□□□□□ -0.46
CPSF7-202ENST00000394888 RAXQ9Y2V3 346 aa12.21□□□□□ -0.46
CPSF7-202ENST00000394888 F11RQ9Y624 299 aaKnown RBP12.21□□□□□ -0.46
CPSF7-202ENST00000394888 FAM90A27PA6NNH2 459 aa12.21□□□□□ -0.46
CPSF7-202ENST00000394888 HOXB4P17483 251 aaPredicted RBP12.21□□□□□ -0.46
CPSF7-202ENST00000394888 OR1L6Q8NGR2 347 aa12.21□□□□□ -0.46
CPSF7-202ENST00000394888 AJUBAQ96IF1 538 aa12.21□□□□□ -0.46
CPSF7-202ENST00000394888 PKIAP61925 76 aa12.2□□□□□ -0.46
CPSF7-202ENST00000394888 UBE2L3P68036 154 aaKnown RBP12.2□□□□□ -0.46
CPSF7-202ENST00000394888 DYNAPQ8N1N2 210 aa12.2□□□□□ -0.46
CPSF7-202ENST00000394888 CLEC7AQ9BXN2 247 aa12.2□□□□□ -0.46
CPSF7-202ENST00000394888 GNB1LQ9BYB4 327 aa12.2□□□□□ -0.46
CPSF7-202ENST00000394888 TRAV34A0A0B4J273 112 aa12.2□□□□□ -0.46
CPSF7-202ENST00000394888 IGLC1P0CG04 106 aa12.2□□□□□ -0.46
CPSF7-202ENST00000394888 RPEL1Q2QD12 228 aa12.2□□□□□ -0.46
CPSF7-202ENST00000394888 RCHY1Q96PM5 261 aa12.2□□□□□ -0.46
CPSF7-202ENST00000394888 IGHV3-21A0A0B4J1V1 117 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 F8W735 103 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-202ENST00000394888 IGLV2-11P01706 119 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 ERVFC1-1P60608 527 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 PPP1R27Q86WC6 154 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 POLR3KQ9Y2Y1 108 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-202ENST00000394888 CORTO00230 105 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 DDTP30046 118 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 Q0VG73 95 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 VMA21Q3ZAQ7 101 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 PAXXQ9BUH6 204 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 SERF1AO75920 110 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 TAS2R45P59539 299 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 FAM231DQ6ZW35 169 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 BCL6BQ8N143 479 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-202ENST00000394888 OR11H6Q8NGC7 330 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 BTF3L4Q96K17 158 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 FBXL15Q9H469 300 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 ABCA2Q9BZC7 2435 aa12.19□□□□□ -0.46
CPSF7-202ENST00000394888 PPIAL4CA0A0B4J2A2 164 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 A6NNC1 897 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 K7EIM0 57 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 PPIAL4GP0DN37 164 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 IER3P46695 156 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 TDRG1Q3Y452 100 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 PEX7O00628 323 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
CPSF7-202ENST00000394888 IGKV1-17P01599 117 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 LEMD1Q68G75 181 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 PSMG3-AS1Q96PY0 264 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 NGBQ9NPG2 151 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 TNFRSF19Q9NS68 423 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 BMPR1BO00238 502 aa12.18□□□□□ -0.46
CPSF7-202ENST00000394888 RPL27AP46776 148 aaKnown RBP12.18□□□□□ -0.46
CPSF7-202ENST00000394888 TNXAQ16473 311 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms