RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 DTX4Q9Y2E6 619 aa6.24□□□□□ -1.41
SYNE2-205ENST00000394768 NBASA2RRP1 2371 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 INS-IGF2F8WCM5 200 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 SRSF4Q08170 494 aaKnown RBP6.23□□□□□ -1.41
SYNE2-205ENST00000394768 SUMO4Q6EEV6 95 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 LINC01356Q8N9X3 169 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 TMEM126AQ9H061 195 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 MYMXA0A1B0GTQ4 84 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 A0A1B0GV90 55 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 A0A1W2PRE2 83 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 UCP1P25874 307 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 FUT5Q11128 374 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 GAGE2EQ4V326 116 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 APCDD1LQ8NCL9 501 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 GAGE2DQ9UEU5 116 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 CBLN1P23435 193 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 SRSF8Q9BRL6 282 aaKnown RBP6.23□□□□□ -1.41
SYNE2-205ENST00000394768 GNB1LQ9BYB4 327 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 FBLN7Q53RD9 439 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 IL17RELQ6ZVW7 336 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 DERL1Q9BUN8 251 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 TRAV40A0A0B4J280 105 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 HLA-DQB1P01920 261 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 SNHG12Q9BXW3 62 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 RHODO00212 210 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 SNRPCP09234 159 aaKnown RBP6.23□□□□□ -1.41
SYNE2-205ENST00000394768 IGHV3-66A0A0C4DH42 116 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 ZNF98A6NK75 572 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 NEGR1Q7Z3B1 354 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 LEAP2Q969E1 77 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 DYSFO75923 2080 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 LHBP01229 141 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 BHLHA9Q7RTU4 235 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 RCC1LQ96I51 464 aaKnown RBP6.23□□□□□ -1.41
SYNE2-205ENST00000394768 KLHDC2Q9Y2U9 406 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 CLDN16Q9Y5I7 305 aa6.23□□□□□ -1.41
SYNE2-205ENST00000394768 CGAP01215 116 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 CCL20P78556 96 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 IGLV3-21P80748 117 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-205ENST00000394768 EIF4EBP2Q13542 120 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-205ENST00000394768 MED12Q93074 2177 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 VCYO14598 125 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 SPSB2Q99619 263 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 CHCHD2Q9Y6H1 151 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-205ENST00000394768 IGHV3OR16-13A0A075B7E8 117 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 TRGV1A0A0A0MS02 117 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 IGHV3-74A0A0B4J1X5 117 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 A0A1B0GTI1 187 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 C12orf77C9JDV5 145 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 ASPHD2Q6ICH7 369 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 SAA2-SAA4A0A096LPE2 208 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 SAA2P0DJI9 122 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-205ENST00000394768 ZFAND6Q6FIF0 208 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 ZAR1Q86SH2 424 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 SIGLEC12Q96PQ1 595 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 GGTLC1Q9BX51 225 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 IGFBP2P18065 325 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 SPINK2P20155 84 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 TIMP3P35625 211 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 SRSF2Q01130 221 aaKnown RBP6.22□□□□□ -1.41
SYNE2-205ENST00000394768 FOXJ2Q9P0K8 574 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 CELA2AP08217 269 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 LINC00271P0C7V0 271 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 IGHV3-35A0A0C4DH35 117 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 TIMM23O14925 209 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 IGHV3-11P01762 117 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 LINC00614P0C842 121 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 CCL3L1P16619 93 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 EFNB1P98172 346 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 REPIN1Q9BWE0 567 aaKnown RBP6.22□□□□□ -1.41
SYNE2-205ENST00000394768 CRIM1Q9NZV1 1036 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 IGHV3-49A0A0A0MS15 119 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 TEX48A0A1B0GUV7 120 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 CD5LO43866 347 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 LYPD1Q8N2G4 141 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 TET1Q8NFU7 2136 aa6.22□□□□□ -1.41
SYNE2-205ENST00000394768 TRAV2A0A0B4J234 112 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 IGKV3D-20A0A0C4DH25 116 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 HIST1H4AP62805 103 aaKnown RBP6.21□□□□□ -1.41
SYNE2-205ENST00000394768 HSD52Q0P140 79 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 SFTA2Q6UW10 78 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 CTHRC1Q96CG8 243 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 SLC25A39Q9BZJ4 359 aaPredicted RBP6.21□□□□□ -1.41
SYNE2-205ENST00000394768 PQLC2LA1A4F0 135 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 SLAQ13239 276 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 MIXL1Q9H2W2 232 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 OSTCQ9NRP0 149 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 TMEM14DPA8MWL7 114 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 IGHV3-23P01764 117 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 FAM27E3Q08E93 113 aa6.21□□□□□ -1.41
SYNE2-205ENST00000394768 SRSF7Q16629 238 aaKnown RBP eCLIP6.21□□□□□ -1.41
SYNE2-205ENST00000394768 H0YL77 283 aa6.21□□□□□ -1.42
SYNE2-205ENST00000394768 UMODP07911 640 aa6.21□□□□□ -1.42
SYNE2-205ENST00000394768 FOXA3P55318 350 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-205ENST00000394768 C15orf32Q32M92 178 aa6.21□□□□□ -1.42
SYNE2-205ENST00000394768 CREBBPQ92793 2442 aa6.21□□□□□ -1.42
SYNE2-205ENST00000394768 GAGE13Q4V321 117 aa6.21□□□□□ -1.42
SYNE2-205ENST00000394768 GRIFINA4D1Z8 144 aa6.21□□□□□ -1.42
SYNE2-205ENST00000394768 CFHR1Q03591 330 aa6.21□□□□□ -1.42
SYNE2-205ENST00000394768 ZNF660Q6AZW8 331 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms