RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 K7ENP7 123 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 STAG3L2P0CL84 134 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 STAG3L3P0CL85 134 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 RPL8P62917 257 aaKnown RBP11.11□□□□□ -0.63
CCDC142-202ENST00000393965 PYGO2Q9BRQ0 406 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 ZNF331Q9NQX6 463 aaPredicted RBP11.11□□□□□ -0.63
CCDC142-202ENST00000393965 CLEC5AQ9NY25 188 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 JKAMPQ9P055 326 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 TMEM178BH3BS89 294 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 HSBP1O75506 76 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 LY6HO94772 140 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 RPLP1P05386 114 aaKnown RBP11.11□□□□□ -0.63
CCDC142-202ENST00000393965 RAB7AP51149 207 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 ZNF138P52744 262 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 TMEM183BQ1AE95 376 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 IBA57Q5T440 356 aaKnown RBP11.11□□□□□ -0.63
CCDC142-202ENST00000393965 RUSC1-AS1Q66K80 236 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 BORCS7Q96B45 105 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 COMMD5Q9GZQ3 224 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 TPSG1Q9NRR2 321 aa11.11□□□□□ -0.63
CCDC142-202ENST00000393965 CORTO00230 105 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 MT-CO2P00403 227 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 NRN1Q9NPD7 142 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 SIAH2O43255 324 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 VENTXO95231 258 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 HSPE1P61604 102 aaKnown RBP11.1□□□□□ -0.63
CCDC142-202ENST00000393965 NPIPB3Q92617 1050 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 IL36BQ9NZH7 164 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 LSM4Q9Y4Z0 139 aaKnown RBP11.1□□□□□ -0.63
CCDC142-202ENST00000393965 TEX50A0A1B0GTY4 177 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 HNRNPA3P51991 378 aaKnown RBP11.1□□□□□ -0.63
CCDC142-202ENST00000393965 C1orf194Q5T5A4 169 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 HARBI1Q96MB7 349 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
CCDC142-202ENST00000393965 ZNF835Q9Y2P0 537 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 ARL2-SNX15V9GYD0 113 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 ITPR1Q14643 2758 aa11.1□□□□□ -0.63
CCDC142-202ENST00000393965 TCF24Q7RTU0 167 aa11.09□□□□□ -0.63
CCDC142-202ENST00000393965 OR1B1Q8NGR6 318 aa11.09□□□□□ -0.63
CCDC142-202ENST00000393965 OR52E5Q8NH55 327 aa11.09□□□□□ -0.63
CCDC142-202ENST00000393965 FLYWCH2Q96CP2 140 aaKnown RBP11.09□□□□□ -0.63
CCDC142-202ENST00000393965 ZC2HC1AQ96GY0 325 aa11.09□□□□□ -0.63
CCDC142-202ENST00000393965 PPIAL4EA0A075B759 164 aa11.09□□□□□ -0.63
CCDC142-202ENST00000393965 PPIAL4DF5H284 164 aa11.09□□□□□ -0.63
CCDC142-202ENST00000393965 LINC00869P0C866 280 aa11.09□□□□□ -0.63
CCDC142-202ENST00000393965 PPIAL4FP0DN26 164 aa11.09□□□□□ -0.63
CCDC142-202ENST00000393965 RNASE6Q93091 150 aaKnown RBP11.09□□□□□ -0.63
CCDC142-202ENST00000393965 UNQ5815/PRO19632Q6UWF5 114 aa11.09□□□□□ -0.63
CCDC142-202ENST00000393965 PIEZO1Q92508 2521 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 COX7A2P2O60397 106 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 LCN2P80188 198 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 RNASEH2CQ8TDP1 164 aaKnown RBP11.08□□□□□ -0.64
CCDC142-202ENST00000393965 CORO2AQ92828 525 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 ZNF714Q96N38 554 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 LINC00312Q9Y6C7 94 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.08□□□□□ -0.643e-7■■■■■ 26.8
CCDC142-202ENST00000393965 hADV38S2A0JD32 116 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 FAM90A9PA6NNJ1 464 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 GGTLC3B5MD39 225 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 UPK2O00526 184 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 TNFRSF1AP19438 455 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 OR5B3Q8NH48 314 aa11.08□□□□□ -0.64
CCDC142-202ENST00000393965 RBM14Q96PK6 669 aaKnown RBP11.08□□□□□ -0.64
CCDC142-202ENST00000393965 CBY3A6NI87 242 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 CGB1A6NKQ9 187 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 LINC00310P59036 64 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 OR10X1Q8NGY0 326 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 LINC00574Q9H8X3 128 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 IGHV3OR16-8A0A075B7F1 116 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 LOXP28300 417 aaPredicted RBP11.07□□□□□ -0.64
CCDC142-202ENST00000393965 BRS3P32247 399 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 TMSB15BA0A087X1C1 80 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 TRAV8-1A0A0A6YYK1 113 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 H0YJW9 148 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 M0R2Z0 102 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 APCSP02743 223 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 SLC25A5P05141 298 aaKnown RBP11.07□□□□□ -0.64
CCDC142-202ENST00000393965 CNTFRP26992 372 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 KIR2DS2P43631 304 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 ZNF833PQ6ZTB9 187 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 DNAJC4Q9NNZ3 241 aa11.07□□□□□ -0.64
CCDC142-202ENST00000393965 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.06□□□□□ -0.64
CCDC142-202ENST00000393965 NKX6-3A6NJ46 265 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 ITGB1BP1O14713 200 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 TNFRSF13BO14836 293 aaPredicted RBP11.06□□□□□ -0.64
CCDC142-202ENST00000393965 SLC25A17O43808 307 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 TMPRSS3P57727 454 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 FXYD7P58549 80 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 SLAQ13239 276 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 DYNLRB1Q9NP97 96 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 TPTE2P1Q5T6R2 138 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 MRPL36Q9P0J6 103 aaKnown RBP11.06□□□□□ -0.64
CCDC142-202ENST00000393965 MSRB2Q9Y3D2 182 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.06□□□□□ -0.64
CCDC142-202ENST00000393965 PGLYRP4Q96LB8 373 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 LPAR2Q9HBW0 351 aa11.06□□□□□ -0.64
CCDC142-202ENST00000393965 C3orf79P0CE67 100 aa11.05□□□□□ -0.64
CCDC142-202ENST00000393965 UBE2G1P62253 170 aa11.05□□□□□ -0.64
CCDC142-202ENST00000393965 PRCDQ00LT1 54 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms