RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PDCD10Q9BUL8 212 aa10.95□□□□□ -0.66
CHMP3-202ENST00000393773 SCPEP1Q9HB40 452 aa10.95□□□□□ -0.66
CHMP3-202ENST00000393773 SEPSECSQ9HD40 501 aaKnown RBP10.95□□□□□ -0.66
CHMP3-202ENST00000393773 HLA-DRB4X5D2U9 266 aa10.95□□□□□ -0.66
CHMP3-202ENST00000393773 TRAV30A0A087WSZ9 112 aa10.94□□□□□ -0.66
CHMP3-202ENST00000393773 M0QYG6 137 aa10.94□□□□□ -0.66
CHMP3-202ENST00000393773 IFNA10P01566 189 aa10.94□□□□□ -0.66
CHMP3-202ENST00000393773 SPART-AS1P0CW21 52 aa10.94□□□□□ -0.66
CHMP3-202ENST00000393773 PIGPP57054 158 aa10.94□□□□□ -0.66
CHMP3-202ENST00000393773 SNRPD3P62318 126 aaKnown RBP10.94□□□□□ -0.66
CHMP3-202ENST00000393773 AARDQ4LEZ3 155 aa10.94□□□□□ -0.66
CHMP3-202ENST00000393773 PRSS54Q6PEW0 395 aa10.94□□□□□ -0.66
CHMP3-202ENST00000393773 OR1S2Q8NGQ3 325 aa10.94□□□□□ -0.66
CHMP3-202ENST00000393773 FAM210BQ96KR6 192 aa10.94□□□□□ -0.66
CHMP3-202ENST00000393773 NRN1Q9NPD7 142 aa10.94□□□□□ -0.66
CHMP3-202ENST00000393773 TMEM189A5PLL7 270 aa10.93□□□□□ -0.66
CHMP3-202ENST00000393773 RND2P52198 227 aa10.93□□□□□ -0.66
CHMP3-202ENST00000393773 AP2S1P53680 142 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-202ENST00000393773 YPEL3P61236 119 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-202ENST00000393773 GDF5OSQ5U4N7 250 aa10.93□□□□□ -0.66
CHMP3-202ENST00000393773 ENY2Q9NPA8 101 aa10.93□□□□□ -0.66
CHMP3-202ENST00000393773 DKK2Q9UBU2 259 aa10.93□□□□□ -0.66
CHMP3-202ENST00000393773 C3orf85A0A1B0GTC6 90 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 RPS10-NUDT3A0A1W2PQS6 291 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 BUB3O43684 328 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 IFNA21P01568 189 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 IL4P05112 153 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 PGAM2P15259 253 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 OR10J1P30954 320 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 EMP1P54849 157 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 DEFB1P60022 68 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 DHODHQ02127 395 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 RNF212Q495C1 297 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 SIGLEC15Q6ZMC9 328 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 SNX29P2Q8IUI4 249 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 DNAH5Q8TE73 4624 aa10.92□□□□□ -0.66
CHMP3-202ENST00000393773 SMIM9A6NGZ8 99 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 ATG12O94817 140 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 APOA1P02647 267 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 UCP1P25874 307 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 HTR2BP41595 481 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 NKX2-1P43699 371 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-202ENST00000393773 TRIM16LQ309B1 348 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 SOHLH1Q5JUK2 328 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 FAM222AQ5U5X8 452 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 ZNF709Q8N972 641 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 Q8WTZ3 238 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 TMEM170AQ8WVE7 144 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 Q9H521 79 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 PLA2G2EQ9NZK7 142 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 RFNGQ9Y644 331 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 HERC1Q15751 4861 aa10.91□□□□□ -0.66
CHMP3-202ENST00000393773 TEX48A0A1B0GUV7 120 aa10.9□□□□□ -0.66
CHMP3-202ENST00000393773 NXPH3O95157 252 aa10.9□□□□□ -0.66
CHMP3-202ENST00000393773 SLC25A4P12235 298 aa10.9□□□□□ -0.66
CHMP3-202ENST00000393773 SPCS3P61009 180 aa10.9□□□□□ -0.66
CHMP3-202ENST00000393773 LSM3P62310 102 aaKnown RBP10.9□□□□□ -0.66
CHMP3-202ENST00000393773 SP6Q3SY56 376 aa10.9□□□□□ -0.66
CHMP3-202ENST00000393773 C2orf83Q53S99 150 aa10.9□□□□□ -0.66
CHMP3-202ENST00000393773 C1orf134Q5TEV5 83 aa10.9□□□□□ -0.66
CHMP3-202ENST00000393773 YIPF6Q96EC8 236 aa10.9□□□□□ -0.66
CHMP3-202ENST00000393773 NIPSNAP3BQ9BS92 247 aa10.9□□□□□ -0.66
CHMP3-202ENST00000393773 IGHV3OR16-12A0A075B7B8 117 aa10.89□□□□□ -0.67
CHMP3-202ENST00000393773 GSTZ1O43708 216 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-202ENST00000393773 CDK2AP2O75956 126 aa10.89□□□□□ -0.67
CHMP3-202ENST00000393773 TOMM40O96008 361 aa10.89□□□□□ -0.67
CHMP3-202ENST00000393773 FXYD7P58549 80 aa10.89□□□□□ -0.67
CHMP3-202ENST00000393773 OXA1LQ15070 435 aa10.89□□□□□ -0.67
CHMP3-202ENST00000393773 ARRDC1Q8N5I2 433 aa10.89□□□□□ -0.67
CHMP3-202ENST00000393773 SLC24A4Q8NFF2 622 aa10.89□□□□□ -0.67
CHMP3-202ENST00000393773 OR52E5Q8NH55 327 aa10.89□□□□□ -0.67
CHMP3-202ENST00000393773 LHFPL5Q8TAF8 219 aa10.89□□□□□ -0.67
CHMP3-202ENST00000393773 RNASEH2CQ8TDP1 164 aaKnown RBP10.89□□□□□ -0.67
CHMP3-202ENST00000393773 RRNAD1Q96FB5 475 aaKnown RBP10.89□□□□□ -0.67
CHMP3-202ENST00000393773 SAV1Q9H4B6 383 aaPredicted RBP10.89□□□□□ -0.67
CHMP3-202ENST00000393773 COMMD3Q9UBI1 195 aa10.89□□□□□ -0.67
CHMP3-202ENST00000393773 SOCS3O14543 225 aa10.88□□□□□ -0.67
CHMP3-202ENST00000393773 IGKV3-20P01619 116 aa10.88□□□□□ -0.67
CHMP3-202ENST00000393773 HTN3P15516 51 aa10.88□□□□□ -0.67
CHMP3-202ENST00000393773 ELK1P19419 428 aa10.88□□□□□ -0.67
CHMP3-202ENST00000393773 RNASE12Q5GAN4 147 aaKnown RBP10.88□□□□□ -0.67
CHMP3-202ENST00000393773 RNASE10Q5GAN6 216 aaKnown RBP10.88□□□□□ -0.67
CHMP3-202ENST00000393773 TMEM88Q6PEY1 159 aa10.88□□□□□ -0.67
CHMP3-202ENST00000393773 FAM219AQ8IW50 185 aa10.88□□□□□ -0.67
CHMP3-202ENST00000393773 OR13C8Q8NGS7 320 aa10.88□□□□□ -0.67
CHMP3-202ENST00000393773 RNASE11Q8TAA1 199 aaKnown RBP10.88□□□□□ -0.67
CHMP3-202ENST00000393773 CLUHP3Q96NS8 147 aa10.88□□□□□ -0.67
CHMP3-202ENST00000393773 WDR12Q9GZL7 423 aaKnown RBP10.88□□□□□ -0.67
CHMP3-202ENST00000393773 SLC35B3Q9H1N7 401 aa10.88□□□□□ -0.67
CHMP3-202ENST00000393773 COPZ2Q9P299 210 aa10.88□□□□□ -0.67
CHMP3-202ENST00000393773 SMIM31A0A1B0GVY4 71 aa10.87□□□□□ -0.67
CHMP3-202ENST00000393773 ATP6V1G2O95670 118 aa10.87□□□□□ -0.67
CHMP3-202ENST00000393773 CD3DP04234 171 aa10.87□□□□□ -0.67
CHMP3-202ENST00000393773 TNP2Q05952 138 aa10.87□□□□□ -0.67
CHMP3-202ENST00000393773 ZNF79Q15937 498 aa10.87□□□□□ -0.67
CHMP3-202ENST00000393773 FOXI2Q6ZQN5 318 aa10.87□□□□□ -0.67
CHMP3-202ENST00000393773 CCDC71LQ8N9Z2 235 aa10.87□□□□□ -0.67
CHMP3-202ENST00000393773 OR4D10Q8NGI6 311 aa10.87□□□□□ -0.67
CHMP3-202ENST00000393773 TMEM222Q9H0R3 208 aa10.87□□□□□ -0.67
CHMP3-202ENST00000393773 HEYLQ9NQ87 328 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms