RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZNF709Q8N972 641 aa11.92□□□□□ -0.5
MKS1-202ENST00000393119 OR4X1Q8NH49 305 aa11.92□□□□□ -0.5
MKS1-202ENST00000393119 GSX1Q9H4S2 264 aaPredicted RBP11.92□□□□□ -0.5
MKS1-202ENST00000393119 NPVFQ9HCQ7 196 aa11.92□□□□□ -0.5
MKS1-202ENST00000393119 HELZ2Q9BYK8 2649 aaKnown RBP11.92□□□□□ -0.5
MKS1-202ENST00000393119 MAP1LC3B2A6NCE7 125 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 NCBP2LA6PVI3 153 aaKnown RBP11.91□□□□□ -0.5
MKS1-202ENST00000393119 TEX22C9J3V5 150 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 EREGO14944 169 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 ACTL6BO94805 426 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 HBE1P02100 147 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 RPL27AP46776 148 aaKnown RBP11.91□□□□□ -0.5
MKS1-202ENST00000393119 COMPP49747 757 aaPredicted RBP11.91□□□□□ -0.5
MKS1-202ENST00000393119 ERHP84090 104 aaKnown RBP11.91□□□□□ -0.5
MKS1-202ENST00000393119 C2orf83Q53S99 150 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 KLF17Q5JT82 389 aaPredicted RBP11.91□□□□□ -0.5
MKS1-202ENST00000393119 KIR3DL3Q8N743 410 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 MAP1LC3BQ9GZQ8 125 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 SDF2L1Q9HCN8 221 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 PXMP4Q9Y6I8 212 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 NAV2Q8IVL1 2488 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 FOXH1O75593 365 aa11.91□□□□□ -0.5
MKS1-202ENST00000393119 MOSP00540 346 aa11.9□□□□□ -0.5
MKS1-202ENST00000393119 AVPP01185 164 aa11.9□□□□□ -0.5
MKS1-202ENST00000393119 CEACAM3P40198 252 aa11.9□□□□□ -0.5
MKS1-202ENST00000393119 MMD2Q8IY49 270 aa11.9□□□□□ -0.5
MKS1-202ENST00000393119 SRSF12Q8WXF0 261 aaKnown RBP11.9□□□□□ -0.5
MKS1-202ENST00000393119 SRD5A3Q9H8P0 318 aa11.9□□□□□ -0.5
MKS1-202ENST00000393119 SLC39A9Q9NUM3 307 aa11.9□□□□□ -0.5
MKS1-202ENST00000393119 TIMM9Q9Y5J7 89 aa11.9□□□□□ -0.5
MKS1-202ENST00000393119 S4R3C0 116 aa11.9□□□□□ -0.5
MKS1-202ENST00000393119 CNIH1O95406 144 aa11.9□□□□□ -0.51
MKS1-202ENST00000393119 IGHV4-38-2P0DP08 117 aa11.9□□□□□ -0.51
MKS1-202ENST00000393119 OPRK1P41145 380 aa11.9□□□□□ -0.51
MKS1-202ENST00000393119 TEPPQ6URK8 271 aa11.9□□□□□ -0.51
MKS1-202ENST00000393119 OR1P1Q8NH06 330 aa11.9□□□□□ -0.51
MKS1-202ENST00000393119 SEPSECSQ9HD40 501 aaKnown RBP11.9□□□□□ -0.51
MKS1-202ENST00000393119 NBR2O15453 112 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 GCGP01275 180 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 OR10J1P30954 320 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 UBE2E1P51965 193 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 NDPQ00604 133 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 CD69Q07108 199 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 CLEC12BQ2HXU8 276 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 STPG3Q8N7X2 389 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 MBD3L1Q8WWY6 194 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 CTDSP1Q9GZU7 261 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 TRAV40A0A0B4J280 105 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 PFN1P07737 140 aaKnown RBP11.89□□□□□ -0.51
MKS1-202ENST00000393119 ZNF90Q03938 601 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 PAX8Q06710 450 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 SLC25A33Q9BSK2 321 aa11.89□□□□□ -0.51
MKS1-202ENST00000393119 LINC00869P0C866 280 aa11.88□□□□□ -0.51
MKS1-202ENST00000393119 BCL2P10415 239 aa11.88□□□□□ -0.51
MKS1-202ENST00000393119 A0A1W2PN81 502 aa11.87□□□□□ -0.51
MKS1-202ENST00000393119 C17orf112F2Z3M2 114 aa11.87□□□□□ -0.51
MKS1-202ENST00000393119 NPFFO15130 113 aa11.87□□□□□ -0.51
MKS1-202ENST00000393119 CHRNA7P36544 502 aa11.87□□□□□ -0.51
MKS1-202ENST00000393119 USF2Q15853 346 aaPredicted RBP11.87□□□□□ -0.51
MKS1-202ENST00000393119 TMEM219Q86XT9 240 aa11.87□□□□□ -0.51
MKS1-202ENST00000393119 SNHG12Q9BXW3 62 aa11.87□□□□□ -0.51
MKS1-202ENST00000393119 VAX2Q9UIW0 290 aa11.87□□□□□ -0.51
MKS1-202ENST00000393119 LINC01548A6NM66 108 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 TMEM11P17152 192 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 FXYD3Q14802 87 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 GOSR1O95249 250 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 PLA2G2AP14555 144 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 CDC34P49427 236 aaPredicted RBP11.86□□□□□ -0.51
MKS1-202ENST00000393119 UBE2G2P60604 165 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 CX3CL1P78423 397 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 PMS2P11Q13670 270 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 C5orf64Q2M2E5 130 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 MORN5Q5VZ52 161 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 TMEM144Q7Z5S9 345 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 OR2T10Q8NGZ9 312 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 C22orf15Q8WYQ4 148 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 C7orf69Q9H7B7 122 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 SLC45A2Q9UMX9 530 aa11.86□□□□□ -0.51
MKS1-202ENST00000393119 IGKV1D-37A0A075B6S9 117 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 A0A0U1RQK1 487 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 NDUFA3O95167 84 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 ASPHD1Q5U4P2 390 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 Q8N6K4 173 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 NPBQ8NG41 125 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 WNT10AQ9GZT5 417 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 HIF1ANQ9NWT6 349 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.515e-7■■■■□ 20.7
MKS1-202ENST00000393119 CTXND1A0A1B0GTU2 59 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 RNF223E7ERA6 249 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 NDUFS8O00217 210 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 PRR20EP86478 221 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 PRR20CP86479 221 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 PRR20DP86480 221 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 PRR20BP86481 221 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 PRR20AP86496 221 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 ACOT6Q3I5F7 207 aaPredicted RBP11.85□□□□□ -0.51
MKS1-202ENST00000393119 MINOS1Q5TGZ0 78 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms