RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 OR8B3Q8NGG8 313 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 GRAMD2BQ96HH9 432 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 HARBI1Q96MB7 349 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 SAP30LQ9HAJ7 183 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 COLQQ9Y215 455 aaPredicted RBP11.32□□□□□ -0.6
CCDC57-203ENST00000392343 PKDREJQ9NTG1 2253 aa11.31□□□□□ -0.6
CCDC57-203ENST00000392343 WT1P19544 449 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-203ENST00000392343 CA7P43166 264 aa11.31□□□□□ -0.6
CCDC57-203ENST00000392343 DIAPH2-AS1Q14236 149 aa11.31□□□□□ -0.6
CCDC57-203ENST00000392343 MPV17L2Q567V2 206 aa11.31□□□□□ -0.6
CCDC57-203ENST00000392343 BHLHA15Q7RTS1 189 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-203ENST00000392343 FDCSPQ8NFU4 85 aa11.31□□□□□ -0.6
CCDC57-203ENST00000392343 MRPL20Q9BYC9 149 aaKnown RBP11.31□□□□□ -0.6
CCDC57-203ENST00000392343 ZNF71Q9NQZ8 489 aaPredicted RBP11.31□□□□□ -0.6
CCDC57-203ENST00000392343 MRPS16Q9Y3D3 137 aaKnown RBP11.31□□□□□ -0.6
CCDC57-203ENST00000392343 LOC105371242A0A075B767 164 aa11.31□□□□□ -0.6
CCDC57-203ENST00000392343 ZZEF1O43149 2961 aa11.31□□□□□ -0.6
CCDC57-203ENST00000392343 MOSP00540 346 aa11.31□□□□□ -0.6
CCDC57-203ENST00000392343 PMCHL2Q9BQD1 86 aa11.31□□□□□ -0.6
CCDC57-203ENST00000392343 ZNF257Q9Y2Q1 563 aa11.31□□□□□ -0.6
CCDC57-203ENST00000392343 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 FNDC10F2Z333 226 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 H0YJW9 148 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 TOX4O94842 621 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 LHBP01229 141 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 SLC25A5P05141 298 aaKnown RBP11.3□□□□□ -0.6
CCDC57-203ENST00000392343 MZT1Q08AG7 82 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 VAMP3Q15836 100 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 LOXL4Q96JB6 756 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 PGLYRP4Q96LB8 373 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 ATMQ13315 3056 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 IGLC7A0M8Q6 106 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 PGPA6NDG6 321 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 KLF3P57682 345 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-203ENST00000392343 LINC00305Q7Z4B0 112 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 ZCCHC24Q8N2G6 241 aaKnown RBP11.3□□□□□ -0.6
CCDC57-203ENST00000392343 PNKDQ8N490 385 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 ADTRPQ96IZ2 230 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 CCL3L1P16619 93 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 WT1-ASQ06250 92 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 FBLN7Q53RD9 439 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 SSX8Q7RTT4 187 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 RBMXL3Q8N7X1 1067 aaKnown RBP11.3□□□□□ -0.6
CCDC57-203ENST00000392343 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.3□□□□□ -0.6
CCDC57-203ENST00000392343 OR4C5Q8NGB2 326 aa11.3□□□□□ -0.6
CCDC57-203ENST00000392343 TPRP12270 2363 aaKnown RBP11.29□□□□□ -0.6
CCDC57-203ENST00000392343 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
CCDC57-203ENST00000392343 POU2AF1Q16633 256 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 Q71RC1 249 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-203ENST00000392343 OR1L8Q8NGR8 309 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 ZNF596Q8TC21 504 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 FXYD5Q96DB9 178 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 GAFA1Q96PS6 74 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 TMEM70Q9BUB7 260 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 PROCRQ9UNN8 238 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 WASHC3Q9Y3C0 194 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 SLC25A15Q9Y619 301 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 ZNF318Q5VUA4 2279 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 DLL1O00548 723 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 OR1B1Q8NGR6 318 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 WIPF2Q8TF74 440 aaPredicted RBP11.29□□□□□ -0.6
CCDC57-203ENST00000392343 ASCL2Q99929 193 aa11.29□□□□□ -0.6
CCDC57-203ENST00000392343 CD59P13987 128 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 HCP5Q6MZN7 132 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 SLC25A48Q6ZT89 311 aaKnown RBP11.28□□□□□ -0.6
CCDC57-203ENST00000392343 MUC15Q8N387 334 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 RPRMLQ8N4K4 120 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 MRPL32Q9BYC8 188 aaKnown RBP11.28□□□□□ -0.6
CCDC57-203ENST00000392343 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 NDUFA4L2Q9NRX3 87 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 CBY3A6NI87 242 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 NUDT3O95989 172 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 CSN3P07498 182 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
CCDC57-203ENST00000392343 TNFSF4P23510 183 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 C1orf162Q8NEQ5 155 aaPredicted RBP11.28□□□□□ -0.6
CCDC57-203ENST00000392343 C22orf15Q8WYQ4 148 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 ZC2HC1AQ96GY0 325 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 RNF7Q9UBF6 113 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 RPUSD1Q9UJJ7 312 aaKnown RBP11.28□□□□□ -0.6
CCDC57-203ENST00000392343 PCNX1Q96RV3 2341 aa11.28□□□□□ -0.6
CCDC57-203ENST00000392343 IGKV1D-37A0A075B6S9 117 aa11.27□□□□□ -0.6
CCDC57-203ENST00000392343 IGHG3P01860 377 aa11.27□□□□□ -0.6
CCDC57-203ENST00000392343 CFHR2P36980 270 aa11.27□□□□□ -0.6
CCDC57-203ENST00000392343 CCL8P80075 99 aa11.27□□□□□ -0.6
CCDC57-203ENST00000392343 TNFAIP6P98066 277 aaPredicted RBP11.27□□□□□ -0.6
CCDC57-203ENST00000392343 KLF5Q13887 457 aaPredicted RBP11.27□□□□□ -0.6
CCDC57-203ENST00000392343 GTSF1Q8WW33 167 aa11.27□□□□□ -0.6
CCDC57-203ENST00000392343 GSX1Q9H4S2 264 aaPredicted RBP11.27□□□□□ -0.6
CCDC57-203ENST00000392343 TPSG1Q9NRR2 321 aa11.27□□□□□ -0.6
CCDC57-203ENST00000392343 DKK4Q9UBT3 224 aa11.27□□□□□ -0.6
CCDC57-203ENST00000392343 SELENOKQ9Y6D0 94 aa11.27□□□□□ -0.6
CCDC57-203ENST00000392343 CNOT1A5YKK6 2376 aaKnown RBP11.27□□□□□ -0.6
CCDC57-203ENST00000392343 IGHV1-24A0A0C4DH33 117 aa11.27□□□□□ -0.61
CCDC57-203ENST00000392343 IGHV1-69-2A0A0G2JMI3 117 aa11.27□□□□□ -0.61
CCDC57-203ENST00000392343 PRR33A8MZF0 331 aa11.27□□□□□ -0.61
CCDC57-203ENST00000392343 SNAI2O43623 268 aa11.27□□□□□ -0.61
CCDC57-203ENST00000392343 TOMM40O96008 361 aa11.27□□□□□ -0.61
CCDC57-203ENST00000392343 FAM120AOSQ5T036 256 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms