RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 A6NHS1 94 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 CHEK1O14757 476 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 ZNF207O43670 478 aaKnown RBP9.49□□□□□ -0.89
GGPS1-203ENST00000391855 IFNA21P01568 189 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 HOXB5P09067 269 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 IGLC1P0CG04 106 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 RND2P52198 227 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 RAB11AP62491 216 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 RPP30P78346 268 aaKnown RBP9.49□□□□□ -0.89
GGPS1-203ENST00000391855 C4orf46Q504U0 113 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 GGNBP1Q5YKI7 109 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 TMEM170AQ8WVE7 144 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 NARS2Q96I59 477 aaKnown RBP9.49□□□□□ -0.89
GGPS1-203ENST00000391855 METTL26Q96S19 204 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 SRD5A3Q9H8P0 318 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 PTTG2Q9NZH5 202 aa9.49□□□□□ -0.89
GGPS1-203ENST00000391855 MRPL36Q9P0J6 103 aaKnown RBP9.49□□□□□ -0.89
GGPS1-203ENST00000391855 PLA2G10O15496 165 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 IGKV1-17P01599 117 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 IFNA4P05014 189 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 GPX4P36969 197 aaPredicted RBP9.48□□□□□ -0.89
GGPS1-203ENST00000391855 CMC4P56277 68 aaPredicted RBP9.48□□□□□ -0.89
GGPS1-203ENST00000391855 YPEL3P61236 119 aaPredicted RBP9.48□□□□□ -0.89
GGPS1-203ENST00000391855 HAGHQ16775 308 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 LINC00322Q6ZN03 302 aaPredicted RBP9.48□□□□□ -0.89
GGPS1-203ENST00000391855 DEFB125Q8N687 156 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 Q8WTZ3 238 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 WDR12Q9GZL7 423 aaKnown RBP9.48□□□□□ -0.89
GGPS1-203ENST00000391855 C20orf85Q9H1P6 137 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 VSIRQ9H7M9 311 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 FLVCR2Q9UPI3 526 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 SYNGR2O43760 224 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 ANXA7P20073 488 aaKnown RBP9.48□□□□□ -0.89
GGPS1-203ENST00000391855 NPPCP23582 126 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 OR10J1P30954 320 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 PAFAH1B2P68402 229 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 MLANAQ16655 118 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 TIGITQ495A1 244 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 SLC35E1Q96K37 410 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 RNF2Q99496 336 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 BATF3Q9NR55 127 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 SELENOKQ9Y6D0 94 aa9.48□□□□□ -0.89
GGPS1-203ENST00000391855 TRAV2A0A0B4J234 112 aa9.47□□□□□ -0.89
GGPS1-203ENST00000391855 WRBO00258 174 aa9.47□□□□□ -0.89
GGPS1-203ENST00000391855 FABP1P07148 127 aa9.47□□□□□ -0.89
GGPS1-203ENST00000391855 MITD1Q8WV92 249 aa9.47□□□□□ -0.89
GGPS1-203ENST00000391855 NPIPB3Q92617 1050 aa9.47□□□□□ -0.89
GGPS1-203ENST00000391855 ACY3Q96HD9 319 aa9.47□□□□□ -0.89
GGPS1-203ENST00000391855 GRAMD2BQ96HH9 432 aa9.47□□□□□ -0.89
GGPS1-203ENST00000391855 GGTLC1Q9BX51 225 aa9.47□□□□□ -0.89
GGPS1-203ENST00000391855 WFDC10AQ9H1F0 79 aa9.47□□□□□ -0.89
GGPS1-203ENST00000391855 LOC102724200A0A096LPH7 203 aaPredicted RBP9.46□□□□□ -0.9
GGPS1-203ENST00000391855 ADAP1O75689 374 aa9.46□□□□□ -0.9
GGPS1-203ENST00000391855 TOMM40O96008 361 aa9.46□□□□□ -0.9
GGPS1-203ENST00000391855 TCRBP04435 133 aa9.46□□□□□ -0.9
GGPS1-203ENST00000391855 IAPPP10997 89 aa9.46□□□□□ -0.9
GGPS1-203ENST00000391855 CRYBB3P26998 211 aa9.46□□□□□ -0.9
GGPS1-203ENST00000391855 NUP62P37198 522 aaPredicted RBP9.46□□□□□ -0.9
GGPS1-203ENST00000391855 NKX2-1P43699 371 aaPredicted RBP9.46□□□□□ -0.9
GGPS1-203ENST00000391855 EIF2B2P49770 351 aaKnown RBP9.46□□□□□ -0.9
GGPS1-203ENST00000391855 ZNF846Q147U1 533 aa9.46□□□□□ -0.9
GGPS1-203ENST00000391855 FAM90A2PQ658T7 463 aa9.46□□□□□ -0.9
GGPS1-203ENST00000391855 MZT2BQ6NZ67 158 aa9.46□□□□□ -0.9
GGPS1-203ENST00000391855 TCF24Q7RTU0 167 aa9.46□□□□□ -0.9
GGPS1-203ENST00000391855 ST8SIA2Q92186 375 aa9.46□□□□□ -0.9
GGPS1-203ENST00000391855 HUWE1Q7Z6Z7 4374 aaKnown RBP9.45□□□□□ -0.9
GGPS1-203ENST00000391855 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
GGPS1-203ENST00000391855 FAM240BA0A1B0GVZ2 78 aa9.45□□□□□ -0.9
GGPS1-203ENST00000391855 HNRNPCP07910 306 aaKnown RBP eCLIP9.45□□□□□ -0.9
GGPS1-203ENST00000391855 ID3Q02535 119 aa9.45□□□□□ -0.9
GGPS1-203ENST00000391855 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
GGPS1-203ENST00000391855 NUDT15Q9NV35 164 aa9.45□□□□□ -0.9
GGPS1-203ENST00000391855 PFDN2Q9UHV9 154 aa9.45□□□□□ -0.9
GGPS1-203ENST00000391855 IGHV3OR16-13A0A075B7E8 117 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 IGHV3-74A0A0B4J1X5 117 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
GGPS1-203ENST00000391855 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
GGPS1-203ENST00000391855 HELTA6NFD8 242 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 ZFP92A6NM28 416 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 DFFBO76075 338 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
GGPS1-203ENST00000391855 RD3LP0DJH9 198 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 APOC4P55056 127 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 ASAH1Q13510 395 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 OR4D5Q8NGN0 318 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 CITED4Q96RK1 184 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 MAGT1Q9H0U3 335 aa9.44□□□□□ -0.9
GGPS1-203ENST00000391855 PAIP2BQ9ULR5 123 aaKnown RBP9.44□□□□□ -0.9
GGPS1-203ENST00000391855 STRAPQ9Y3F4 350 aaKnown RBP9.44□□□□□ -0.9
GGPS1-203ENST00000391855 COL7A1Q02388 2944 aa9.43□□□□□ -0.9
GGPS1-203ENST00000391855 TRAV6A0A075B6T7 132 aa9.43□□□□□ -0.9
GGPS1-203ENST00000391855 CFDP00746 253 aaPredicted RBP9.43□□□□□ -0.9
GGPS1-203ENST00000391855 IL4P05112 153 aa9.43□□□□□ -0.9
GGPS1-203ENST00000391855 P2RY1P47900 373 aa9.43□□□□□ -0.9
GGPS1-203ENST00000391855 AP2S1P53680 142 aaPredicted RBP9.43□□□□□ -0.9
GGPS1-203ENST00000391855 GAMTQ14353 236 aa9.43□□□□□ -0.9
GGPS1-203ENST00000391855 IAH1Q2TAA2 248 aaPredicted RBP9.43□□□□□ -0.9
GGPS1-203ENST00000391855 SPANXN5Q5MJ07 72 aa9.43□□□□□ -0.9
GGPS1-203ENST00000391855 OR8G2PQ6IF36 304 aa9.43□□□□□ -0.9
GGPS1-203ENST00000391855 OR51G1Q8NGK1 321 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms