RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 COMMD10Q9Y6G5 202 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 IKBKGQ9Y6K9 419 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 SESN1Q9Y6P5 492 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 AP1M2Q9Y6Q5 423 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 DDX49Q9Y6V7 483 aaKnown RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 ENPP4Q9Y6X5 453 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 U3KQ87 197 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 U3KQV3 271 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 V9GYY5 206 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 ASPMQ8IZT6 3477 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 NACAE9PAV3 2078 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 ARHGEF17Q96PE2 2063 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 PEAK1Q9H792 1746 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 TNS1Q9HBL0 1735 aaKnown RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 TRPM3Q9HCF6 1732 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 EIF3AQ14152 1382 aaKnown RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 RTL9Q8NET4 1388 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 ABCC11Q96J66 1382 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 TMEM2Q9UHN6 1383 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 MED23Q9ULK4 1368 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 NINLQ9Y2I6 1382 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 CACNA1DQ01668 2161 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 DOCK10Q96BY6 2186 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 ZZEF1O43149 2961 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 FRMPD3Q5JV73 1810 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 URB1O60287 2271 aaKnown RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 AHCTF1Q8WYP5 2266 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 UHRF1BP1LA0JNW5 1464 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 CCDC88BA6NC98 1476 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 A2ML1A8K2U0 1454 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 POLA1P09884 1462 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 PZPP20742 1482 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 ERCC6Q03468 1493 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 CAMSAP2Q08AD1 1489 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 PLB1Q6P1J6 1458 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 MAGI2Q86UL8 1455 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 RALGAPBQ86X10 1494 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 PLEKHH2Q8IVE3 1493 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 TEX14Q8IWB6 1497 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 IFT140Q96RY7 1462 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 CD163L1Q9NR16 1453 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 MLH3Q9UHC1 1453 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 WDR7Q9Y4E6 1490 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 UNC80Q8N2C7 3258 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 EIF4G3O43432 1585 aaKnown RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 GLI2P10070 1586 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 KDM5CP41229 1560 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 EIF4G1Q04637 1599 aaKnown RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 CDH23Q9H251 3354 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 DIP2BQ9P265 1576 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 SETBP1Q9Y6X0 1596 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 CROCC2H7BZ55 1655 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 TET3O43151 1660 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 ZNF831Q5JPB2 1677 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 USP54Q70EL1 1684 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 QRICH2Q9H0J4 1663 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 ITSN2Q9NZM3 1697 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 CEP350Q5VT06 3117 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 CFAP47Q6ZTR5 3102 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 SVILO95425 2214 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 LOC285556D6RIA3 1793 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 SIPA1L3O60292 1781 aaPredicted RBP-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 MAST2Q6P0Q8 1798 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 CASZ1Q86V15 1759 aa-0.11□□□□□ -2.43
TRAJ54-201ENST00000390484 LRBAP50851 2863 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 BRCA2P51587 3418 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 TTC41PQ6P2S7 1318 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 CCDC171Q6TFL3 1326 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 SYNRGQ9UMZ2 1314 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 TSPOAP1O95153 1857 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 KIF26AQ9ULI4 1882 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 PRUNE2Q8WUY3 3088 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 MCM3APO60318 1980 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 C2orf16Q68DN1 1984 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 TCF20Q9UGU0 1960 aaKnown RBP-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 FHAD1B1AJZ9 1412 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 ABCC5O15440 1437 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 KDM6AO15550 1401 aaPredicted RBP-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 CEP162Q5TB80 1403 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 C9orf84Q5VXU9 1444 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 SCAPERQ9BY12 1400 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 ANKRD50Q9ULJ7 1429 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 MYO10Q9HD67 2058 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 CENPEQ02224 2701 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 NEXMIFQ5QGS0 1516 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 MAGI3Q5TCQ9 1506 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 ZFYVE16Q7Z3T8 1539 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 DLC1Q96QB1 1528 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 ARHGEF12Q9NZN5 1544 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 FAM135AQ9P2D6 1515 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 MYO9BQ13459 2157 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 LRRC37A3O60309 1634 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 DEPDC5O75140 1603 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 POLEQ07864 2286 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 RNF17Q9BXT8 1623 aaKnown RBP-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 DOPEY2Q9Y3R5 2298 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 BCORL1Q5H9F3 1711 aa-0.12□□□□□ -2.43
TRAJ54-201ENST00000390484 CDC42BPAQ5VT25 1732 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms