RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 EEF1AKMT3Q96AZ1 226 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 FBXL7Q9UJT9 491 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 LAMTOR2Q9Y2Q5 125 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 ATP5G2Q06055 141 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 C21orf62-AS1Q17RA5 79 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 DNLZQ5SXM8 178 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 ARPC1AQ92747 370 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 TNFRSF14Q92956 283 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 OBSL1O75147 1896 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 NBR2O15453 112 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 ZNF726P1Q15940 193 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 FAM169BQ8N8A8 192 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 MYOD1P15172 320 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 TMEM208Q9BTX3 173 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 KIF26AQ9ULI4 1882 aaPredicted RBP13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 DKK1O94907 266 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 IGHV3-23P01764 117 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 PRB3Q04118 309 aaPredicted RBP13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 TM4SF20Q53R12 229 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 TMEM200BQ69YZ2 307 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 PVRIGQ6DKI7 326 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 WDR86Q86TI4 376 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 NUDT10Q8NFP7 164 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 TMEM167AQ8TBQ9 72 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 NUDT11Q96G61 164 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 ZNF414Q96IQ9 312 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 MYO7BQ6PIF6 2116 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 IGHV2-5P01817 119 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 NEU4Q8WWR8 484 aaPredicted RBP13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 TNFSF13O75888 250 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 NUDT3O95989 172 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 FABP2P12104 132 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 GCSHP23434 173 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 C1orf194Q5T5A4 169 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 PHLDA3Q9Y5J5 127 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 CLEC2AQ6UVW9 174 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 C8orf46Q8TAG6 207 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 GAFA1Q96PS6 74 aa13.24□□□□□ -0.29
PTPRN2-201ENST00000389413 CACNA1HO95180 2353 aa13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 Q6ZSR3 168 aa13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 ATP5L2Q7Z4Y8 100 aa13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 ST6GALNAC6Q969X2 333 aa13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 RNF125Q96EQ8 232 aa13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 IGHV3OR16-13A0A075B7E8 117 aa13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 IGHV3-74A0A0B4J1X5 117 aa13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 FNDC10F2Z333 226 aa13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 ITGB1BP1O14713 200 aa13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 DGAT2L7PQ6IED9 249 aa13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 SLC25A48Q6ZT89 311 aaKnown RBP13.23□□□□□ -0.29
PTPRN2-201ENST00000389413 TRBV20OR9-2A0A075B6H5 130 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 HTN1P15515 57 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 KLRB1Q12918 225 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 BEND2Q8NDZ0 799 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 ALPK3Q96L96 1907 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 TRAV9-2A0A087WT02 112 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 GZMBP10144 247 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 H0YJW9 148 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 PRSS8Q16651 343 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 ORMDL3Q8N138 153 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 ZNF502Q8TBZ5 544 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 RAB37Q96AX2 223 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 TMEM178BH3BS89 294 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 DMRTA1Q5VZB9 504 aa13.22□□□□□ -0.29
PTPRN2-201ENST00000389413 CENPFP49454 3210 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 ZNF207O43670 478 aaKnown RBP13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 DLX1P56177 255 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 MUC21A0A0G2JKD1 596 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 MUC21A0A140T8X8 626 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 A1L4Q6 167 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 FBLL1A6NHQ2 334 aaKnown RBP13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 LYNX1G3V0Z9 82 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 LINC00614P0C842 121 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 LYNX1P0DP58 116 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 MUC21Q5SSG8 566 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 C7orf71A4D174 169 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 PSMB2P49721 201 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 ZNF474Q6S9Z5 364 aaPredicted RBP13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 PSG8Q9UQ74 426 aa13.21□□□□□ -0.29
PTPRN2-201ENST00000389413 DOCK11Q5JSL3 2073 aa13.21□□□□□ -0.3
PTPRN2-201ENST00000389413 IGHV1-8P0DP01 117 aa13.21□□□□□ -0.3
PTPRN2-201ENST00000389413 GPR183P32249 361 aa13.21□□□□□ -0.3
PTPRN2-201ENST00000389413 HAPLN4Q86UW8 402 aa13.21□□□□□ -0.3
PTPRN2-201ENST00000389413 LTBP2Q14767 1821 aa13.21□□□□□ -0.3
PTPRN2-201ENST00000389413 SRSF6Q13247 344 aaKnown RBP13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 RASL11AQ6T310 242 aa13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 FER1L6-AS1Q8NA97 138 aa13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 F11RQ9Y624 299 aaKnown RBP13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 GPX1P07203 203 aa13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 RPL13AP40429 203 aaKnown RBP13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 CYB5R2Q6BCY4 276 aa13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 Q6ZR03 302 aa13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 NIT1Q86X76 327 aa13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 ZNF664Q8N3J9 261 aa13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 RNASE2P10153 161 aaKnown RBP13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 WNK2Q9Y3S1 2297 aa13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 NBASA2RRP1 2371 aa13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 FAM53AQ6NSI3 398 aaPredicted RBP13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 NUP37Q8NFH4 326 aa13.2□□□□□ -0.3
PTPRN2-201ENST00000389413 PEF1Q9UBV8 284 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms