RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 STPG4Q8N801 248 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 Q9H3A6 140 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 SRSF9Q13242 221 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRAPPC9-201ENST00000389328 PRB3Q04118 309 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC9-201ENST00000389328 ZFP36L1Q07352 338 aaKnown RBP10.83□□□□□ -0.68
TRAPPC9-201ENST00000389328 PNKDQ8N490 385 aa10.83□□□□□ -0.68
TRAPPC9-201ENST00000389328 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC9-201ENST00000389328 ORAOV1Q8WV07 137 aa10.83□□□□□ -0.68
TRAPPC9-201ENST00000389328 A0A087X0K7 114 aa10.83□□□□□ -0.68
TRAPPC9-201ENST00000389328 KLK10O43240 276 aa10.83□□□□□ -0.68
TRAPPC9-201ENST00000389328 SLC25A33Q9BSK2 321 aa10.83□□□□□ -0.68
TRAPPC9-201ENST00000389328 OR2T8A6NH00 312 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 CGB1A6NKQ9 187 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 NPPCP23582 126 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 RPL15P61313 204 aaKnown RBP10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 MRPL52Q86TS9 123 aaKnown RBP10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 SH2D7A6NKC9 451 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 PRELID3AQ96N28 172 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 MEGF9Q9H1U4 602 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 COX11Q9Y6N1 276 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 CACNA1BQ00975 2339 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 FAM90A9PA6NNJ1 464 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 MLNRO43193 412 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 TMUB1Q9BVT8 246 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 ST20Q9HBF5 79 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 GP6Q9HCN6 339 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 SPCS1Q9Y6A9 102 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 A0A1B0GWJ7 208 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 IL4P05112 153 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 GLRXP35754 106 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 ZCCHC24Q8N2G6 241 aaKnown RBP10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 TMEM105Q8N8V8 129 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 C9orf106Q8NAJ2 232 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 FGF23Q9GZV9 251 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 SPRR3Q9UBC9 169 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 LY96Q9Y6Y9 160 aa10.82□□□□□ -0.68
TRAPPC9-201ENST00000389328 KIF26AQ9ULI4 1882 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 AHRRA9YTQ3 701 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 PSG1P11464 419 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 RPL7P18124 248 aaKnown RBP10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 THADAQ6YHU6 1953 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 KIR2DL5BA0A0G2JN68 375 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 KIR2DL5BA0A0G2JPC4 375 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 C16orf97H3BN30 126 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 TEX43Q6ZNM6 134 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 WDR86Q86TI4 376 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 KIR2DL5AQ8N109 375 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 FDCSPQ8NFU4 85 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 RCHY1Q96PM5 261 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 PLCE1Q9P212 2302 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 IGKV3-7A0A075B6H7 116 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 F5H697 171 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 SMIM17P0DL12 118 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 TPTE2P1Q5T6R2 138 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 SPANXN1Q5VSR9 72 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 C18orf32Q8TCD1 76 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 TMEM186Q96B77 213 aa10.81□□□□□ -0.68
TRAPPC9-201ENST00000389328 TRAV8-6A0A0B4J262 113 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 SPAARA0A1B0GVQ0 90 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 C9orf172C9J069 976 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 C2orf83Q53S99 150 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 MAP1LC3AQ9H492 121 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 IGHV1-69-2A0A0G2JMI3 117 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 MAJINQ3KP22 176 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 ARL6IP6Q8N6S5 226 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 KLK15Q9H2R5 256 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 FOXA2Q9Y261 457 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 FMC1Q96HJ9 113 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 HIST1H4GQ99525 98 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 V9GYV3 84 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 LOC107984156A0A0G2JMH3 177 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 TCRBV4S1A1TA0A5B7 111 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 SMIM13P0DJ93 91 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 CD24P25063 80 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 ARL17AQ8IVW1 177 aa10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 SOX21Q9Y651 276 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC9-201ENST00000389328 CEACAM3P40198 252 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 SLAQ13239 276 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 KIR3DL3Q8N743 410 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 FBXL15Q9H469 300 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 ZNF71Q9NQZ8 489 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 SRRM5B3KS81 715 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 H3BVH4 76 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 LGALS7P47929 136 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 HIST1H1AQ02539 215 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 OR4A5Q8NH83 315 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 NTN3O00634 580 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 TDGF1P13385 188 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 RELQ04864 619 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 FAM27E3Q08E93 113 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 GAGE1Q13065 139 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 ASCL5Q7RTU5 278 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 TMEM160Q9NX00 188 aa10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 MRPL27Q9P0M9 148 aaKnown RBP10.79□□□□□ -0.68
TRAPPC9-201ENST00000389328 IGHV3OR16-8A0A075B7F1 116 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 LMO1P25800 156 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 BMI1P35226 326 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 PDLIM4P50479 330 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 CACNG7P62955 275 aa10.78□□□□□ -0.68
TRAPPC9-201ENST00000389328 ZNF502Q8TBZ5 544 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms