RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SNHG12Q9BXW3 62 aa12.01□□□□□ -0.49
SCFD2-201ENST00000388940 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
SCFD2-201ENST00000388940 PKDREJQ9NTG1 2253 aa12□□□□□ -0.49
SCFD2-201ENST00000388940 BUB1B-PAK6H3BSN5 160 aa12□□□□□ -0.49
SCFD2-201ENST00000388940 RPL27AP46776 148 aaKnown RBP12□□□□□ -0.49
SCFD2-201ENST00000388940 OR1L6Q8NGR2 347 aa12□□□□□ -0.49
SCFD2-201ENST00000388940 CLEC7AQ9BXN2 247 aa12□□□□□ -0.49
SCFD2-201ENST00000388940 GNB1LQ9BYB4 327 aa12□□□□□ -0.49
SCFD2-201ENST00000388940 MRPL18Q9H0U6 180 aaKnown RBP12□□□□□ -0.49
SCFD2-201ENST00000388940 SIGLEC9Q9Y336 463 aa12□□□□□ -0.49
SCFD2-201ENST00000388940 IGHV1-3A0A0C4DH29 117 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 ESDP10768 282 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 CBLN1P23435 193 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 CA7P43166 264 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 CX3CL1P78423 397 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 MUC15Q8N387 334 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 STXBP6Q8NFX7 210 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 LINC01560Q8TB33 94 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 INSIG2Q9Y5U4 225 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 IGHV3-72A0A0B4J1Y9 119 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 CORTO00230 105 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 COMPP49747 757 aaPredicted RBP11.99□□□□□ -0.49
SCFD2-201ENST00000388940 TMEM256Q8N2U0 113 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 TMEM116Q8NCL8 245 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 FXYD5Q96DB9 178 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 RNF5Q99942 180 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 NAV3Q8IVL0 2385 aa11.99□□□□□ -0.49
SCFD2-201ENST00000388940 REG1AP05451 166 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 MFAP2P55001 183 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 TNXAQ16473 311 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 ZNF329Q86UD4 541 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 OR8I2Q8N0Y5 310 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 RNASE7Q9H1E1 156 aaKnown RBP11.98□□□□□ -0.49
SCFD2-201ENST00000388940 TNFRSF19Q9NS68 423 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 AMMECR1Q9Y4X0 333 aaPredicted RBP11.98□□□□□ -0.49
SCFD2-201ENST00000388940 PPIAL4CA0A0B4J2A2 164 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 SMIM27A0A1W2PRY6 76 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 C22orf46C9J442 243 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 FCN1O00602 326 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 MT-ND6P03923 174 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 PPIAL4GP0DN37 164 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 PYYP10082 97 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 MYCNOSP40205 109 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 ZNF672Q499Z4 452 aaPredicted RBP11.98□□□□□ -0.49
SCFD2-201ENST00000388940 IBA57Q5T440 356 aaKnown RBP11.98□□□□□ -0.49
SCFD2-201ENST00000388940 WDR73Q6P4I2 378 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 C22orf15Q8WYQ4 148 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 PERPQ96FX8 193 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 MSRB2Q9Y3D2 182 aa11.98□□□□□ -0.49
SCFD2-201ENST00000388940 MALRD1Q5VYJ5 2156 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 LYNX1G3V0Z9 82 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 SIAH2O43255 324 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 NUPR1O60356 82 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 LYNX1P0DP58 116 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 IER3P46695 156 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 Q0VG73 95 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 IQCJQ1A5X6 159 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 HCP5Q6MZN7 132 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 FAM231DQ6ZW35 169 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 LINC00305Q7Z4B0 112 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 PPP1R27Q86WC6 154 aa11.97□□□□□ -0.49
SCFD2-201ENST00000388940 LY6LH3BQJ8 138 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 PLXNB1O43157 2135 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 CRISP2P16562 243 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 CNTFRP26992 372 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 PLP1P60201 277 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 PAFAH1B2P68402 229 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 TP53TG3Q9ULZ0 132 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 SNURFLB1AK76 121 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 PEX7O00628 323 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 NPSP0C0P6 89 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 ST6GALNAC3Q8NDV1 305 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 LY6G5BQ8NDX9 201 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 CMTM2Q8TAZ6 248 aa11.96□□□□□ -0.49
SCFD2-201ENST00000388940 F11RQ9Y624 299 aaKnown RBP11.96□□□□□ -0.49
SCFD2-201ENST00000388940 ATMQ13315 3056 aa11.96□□□□□ -0.5
SCFD2-201ENST00000388940 A0A1B0GUS0 222 aa11.95□□□□□ -0.5
SCFD2-201ENST00000388940 FAM90A27PA6NNH2 459 aa11.95□□□□□ -0.5
SCFD2-201ENST00000388940 ZNF705GA8MUZ8 300 aaPredicted RBP11.95□□□□□ -0.5
SCFD2-201ENST00000388940 TEX22C9J3V5 150 aa11.95□□□□□ -0.5
SCFD2-201ENST00000388940 RPLP1P05386 114 aaKnown RBP11.95□□□□□ -0.5
SCFD2-201ENST00000388940 MGST1P10620 155 aaKnown RBP11.95□□□□□ -0.5
SCFD2-201ENST00000388940 RUSC1-AS1Q66K80 236 aa11.95□□□□□ -0.5
SCFD2-201ENST00000388940 PIEZO2Q9H5I5 2752 aa11.95□□□□□ -0.5
SCFD2-201ENST00000388940 GRIFINA4D1Z8 144 aa11.95□□□□□ -0.5
SCFD2-201ENST00000388940 UCNP55089 124 aa11.95□□□□□ -0.5
SCFD2-201ENST00000388940 OR8B3Q8NGG8 313 aa11.95□□□□□ -0.5
SCFD2-201ENST00000388940 RPEQ96AT9 228 aa11.95□□□□□ -0.5
SCFD2-201ENST00000388940 OR8B2Q96RD0 313 aa11.95□□□□□ -0.5
SCFD2-201ENST00000388940 SRSF8Q9BRL6 282 aaKnown RBP11.95□□□□□ -0.5
SCFD2-201ENST00000388940 CCL21O00585 134 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 FRMD6-AS1P0C7T7 363 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 DLX1P56177 255 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 LINC00310P59036 64 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 RANP62826 216 aaKnown RBP11.94□□□□□ -0.5
SCFD2-201ENST00000388940 FXYD3Q14802 87 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 TMEM136Q6ZRR5 245 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 MBD6Q96DN6 1003 aa11.94□□□□□ -0.5
SCFD2-201ENST00000388940 IZUMO1RA6ND01 250 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms