RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 TTLQ8NG68 377 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR7G2Q8NG99 324 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR10A7Q8NGE5 316 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR56B1Q8NGI3 324 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 RHEBL1Q8TAI7 183 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 MRPL30Q8TCC3 161 aaKnown RBP-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 FAM172AQ8WUF8 416 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 DNAJB3Q8WWF6 145 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 UBE2WQ96B02 151 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 LRRC39Q96DD0 335 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 DIRAS2Q96HU8 199 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 RILPQ96NA2 401 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 YPEL4Q96NS1 127 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 TMEM237Q96Q45 408 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 VAT1Q99536 393 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 MAF1Q9H063 256 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 METTL9Q9H1A3 318 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 GEMIN7Q9H840 131 aaKnown RBP-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 VCPKMTQ9H867 229 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 NDUFA4L2Q9NRX3 87 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 COA4Q9NYJ1 87 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 FKBP11Q9NYL4 201 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 PSMC3IPQ9P2W1 217 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 LINC00474Q9P2X8 69 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 MRM2Q9UI43 246 aaKnown RBP-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 STOML2Q9UJZ1 356 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 EPDR1Q9UM22 224 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 TRAF3IP3Q9Y228 551 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 NUBP2Q9Y5Y2 271 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 ABCC5O15440 1437 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 CLIP1P30622 1438 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 SUPT6HQ7KZ85 1726 aaKnown RBP-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 A0A0G2JND7 137 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 LOC100130705A0A1B0GUX0 176 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 METTL21EPA6NDL7 271 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 F8W1H4 67 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 H3BSH0 61 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 EIF3FO00303 357 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 IFRD1O00458 451 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 HMGN4O00479 90 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 AZIN1O14977 448 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 PTP4A3O75365 173 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 STK16O75716 305 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 DIRAS1O95057 198 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 SIX6O95475 246 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 BAG2O95816 211 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 TCRBP04435 133 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 TRGC1P0CF51 173 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 SPI1P17947 270 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 ADCYAP1P18509 176 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 PRKACBP22694 351 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 PSMA5P28066 241 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 PEX19P40855 299 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 ATXN3P54252 364 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 NDUFA6P56556 154 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 TMEM33P57088 247 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR2B8PP59922 312 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 ANAPC15P60006 121 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 RRAS2P62070 204 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 TSPAN5P62079 268 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 PPP1CAP62136 330 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 TFF3Q07654 80 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 HSDL1Q3SXM5 330 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 VPS26BQ4G0F5 336 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 FAHD1Q6P587 224 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 SPESP1Q6UW49 350 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 IKBIPQ70UQ0 350 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 IFNEQ86WN2 208 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 SLC25A29Q8N8R3 303 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 FADS6Q8N9I5 356 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR7G3Q8NG95 312 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR2Z1Q8NG97 314 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR5A2Q8NGI9 324 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR5AK2Q8NH90 309 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 PPP1R1CQ8WVI7 109 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 C10orf82Q8WW14 230 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 TEKT4Q8WW24 435 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 C22orf15Q8WYQ4 148 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 DTD2Q96FN9 168 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 REEP6Q96HR9 211 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 PRELID3AQ96N28 172 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 OPALINQ96PE5 141 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 TRNT1Q96Q11 434 aaKnown RBP-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 RASL10BQ96S79 203 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 SLC50A1Q9BRV3 221 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 TMEM59Q9BXS4 323 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 C11orf68Q9H3H3 251 aaKnown RBP-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 TPT1P8Q9HAU6 139 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 MED11Q9P086 117 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 ACTR3BQ9P1U1 418 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 RABAC1Q9UI14 185 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 LINC00527Q9UJ94 153 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 FBXW2Q9UKT8 454 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 PHLDA3Q9Y5J5 127 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 PDCD11Q14690 1871 aaKnown RBP-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 LMTK2Q8IWU2 1503 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 KIF20BQ96Q89 1820 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 LRRIQ1Q96JM4 1722 aa-2.08□□□□□ -2.74
RNU6-540P-201ENST00000384622 POLR3AO14802 1390 aaPredicted RBP-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms