RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 DNMT1P26358 1616 aaKnown RBP-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 TRAV8-2A0A0B4J237 113 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 TRAV1-2A0A0B4J238 106 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 GOLGA8RI6L899 631 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CXCR6O00574 342 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 DEGS1O15121 323 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 SCGB1D1O95968 90 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ASS1P00966 412 aaKnown RBP-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 MRPL19P49406 292 aaKnown RBP-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 HERVK_113P63121 156 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 MRPS22P82650 360 aaKnown RBP-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 HLA-DRB5Q30154 266 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ZNF818PQ6ZRF7 136 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ZBTB8OSQ8IWT0 167 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 OFCC1Q8IZS5 231 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 OR8H3Q8N146 312 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 JAGN1Q8N5M9 183 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 OR2T10Q8NGZ9 312 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 OR2T4Q8NH00 348 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 OR5B3Q8NH48 314 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ASZ1Q8WWH4 475 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 H1FXQ92522 213 aaKnown RBP-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 RPEQ96AT9 228 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 C2orf50Q96LR7 162 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 RILPQ96NA2 401 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 XPO6Q96QU8 1125 aaKnown RBP-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 TMEM208Q9BTX3 173 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 NHP2Q9NX24 153 aaKnown RBP-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 MED11Q9P086 117 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 PEX16Q9Y5Y5 336 aa-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CEP170BQ9Y4F5 1589 aaPredicted RBP-3.94□□□□□ -3.04
RNU6-1340P-201ENST00000384438 A0A1B0GX12 115 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 C9orf170A2RU37 121 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ZNF670-ZNF695F2Z2N8 137 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 H3BP45 60 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ATP6V1G1O75348 118 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 VPS26AO75436 327 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 MCF2P10911 925 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 VBP1P61758 197 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 MIR22HGQ0VDD5 57 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 PDK3Q15120 406 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CDNFQ49AH0 187 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 SLC48A1Q6P1K1 146 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 VTCN1Q7Z7D3 282 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 OR4K17Q8NGC6 315 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CLEC2BQ92478 149 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 GPR146Q96CH1 333 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ECHDC3Q96DC8 303 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CFAP36Q96G28 342 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 PACRGQ96M98 296 aaPredicted RBP-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 SPXQ9BT56 116 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 SUCNR1Q9BXA5 334 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 MED28Q9H204 178 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 RABL2AQ9UBK7 228 aaPredicted RBP-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 IL19Q9UHD0 177 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CDH23Q9H251 3354 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 LRRC37A2A6NM11 1700 aa-3.95□□□□□ -3.04
RNU6-1340P-201ENST00000384438 A0A0B4J2E0 115 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 A0A1B0GW54 56 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 DUXBA0A1W2PPF3 345 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 UBE2CO00762 179 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 MFSD11O43934 449 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 HLA-DQB2P05538 268 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 SETSIPP0DME0 302 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 OR10J1P30954 320 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CA8P35219 290 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 PPP2R5AQ15172 486 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CAVIN4Q5BKX8 364 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 RIPPLY2Q5TAB7 128 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ARPINQ7Z6K5 226 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CCDC83Q8IWF9 413 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CPXCR1Q8N123 301 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 OR8H2Q8N162 312 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 GDPD1Q8N9F7 314 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 IQUBQ8NA54 791 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 OR52E4Q8NGH9 312 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 SLC37A2Q8TED4 501 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CDKL2Q92772 493 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 DPH3Q96FX2 82 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ABHD14BQ96IU4 210 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 KCTD7Q96MP8 289 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 SCGB3A1Q96QR1 104 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 ATP5SQ99766 215 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 TREX2Q9BQ50 279 aaPredicted RBP-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 EBPLQ9BY08 206 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 C9orf78Q9NZ63 289 aaPredicted RBP-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 NDUFA13Q9P0J0 144 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 CDKN2A-AS1Q9UH64 79 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 LAMTOR3Q9UHA4 124 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 MGAT4BQ9UQ53 548 aa-3.96□□□□□ -3.04
RNU6-1340P-201ENST00000384438 TRAV9-1A0A075B6T8 112 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 TRBV7-4A0A0J9YYF1 115 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 TMEM189A5PLL7 270 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 GOLGA8JA6NMD2 632 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 I3L4J1 428 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 LGALS8O00214 317 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 POLR2DO15514 142 aaKnown RBP-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 TTC4O95801 387 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 GOLGA8HP0CJ92 632 aa-3.97□□□□□ -3.04
RNU6-1340P-201ENST00000384438 FGF6P10767 208 aa-3.97□□□□□ -3.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms