RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 DBX1A6NMT0 343 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 LYRM1O43325 122 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 IGHV3-48P01763 117 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 BTCP35070 178 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 SNCAP37840 140 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 PIGPP57054 158 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 TBC1D26Q86UD7 250 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 ZFAND1Q8TCF1 268 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 DEDD2Q8WXF8 326 aa11.63□□□□□ -0.55
VCX3A-201ENST00000381089 C7orf50Q9BRJ6 194 aaKnown RBP11.63□□□□□ -0.55
VCX3A-201ENST00000381089 PUS1Q9Y606 427 aaKnown RBP eCLIP11.63□□□□□ -0.55
VCX3A-201ENST00000381089 IGHV3-66A0A0C4DH42 116 aa11.62□□□□□ -0.55
VCX3A-201ENST00000381089 NPPCP23582 126 aa11.62□□□□□ -0.55
VCX3A-201ENST00000381089 HSPE1P61604 102 aaKnown RBP11.62□□□□□ -0.55
VCX3A-201ENST00000381089 PVRIGQ6DKI7 326 aa11.62□□□□□ -0.55
VCX3A-201ENST00000381089 Q6ZTC4 211 aa11.62□□□□□ -0.55
VCX3A-201ENST00000381089 TMED4Q7Z7H5 227 aa11.62□□□□□ -0.55
VCX3A-201ENST00000381089 RNF126Q9BV68 326 aa11.62□□□□□ -0.55
VCX3A-201ENST00000381089 COPZ2Q9P299 210 aa11.62□□□□□ -0.55
VCX3A-201ENST00000381089 CORTO00230 105 aa11.61□□□□□ -0.55
VCX3A-201ENST00000381089 APOHP02749 345 aaPredicted RBP11.61□□□□□ -0.55
VCX3A-201ENST00000381089 RBMY1A1P0DJD3 496 aaKnown RBP11.61□□□□□ -0.55
VCX3A-201ENST00000381089 RBMY1CP0DJD4 496 aa11.61□□□□□ -0.55
VCX3A-201ENST00000381089 EIF2B2P49770 351 aaKnown RBP11.61□□□□□ -0.55
VCX3A-201ENST00000381089 SUB1P53999 127 aaKnown RBP eCLIP11.61□□□□□ -0.55
VCX3A-201ENST00000381089 RBMY1FQ15415 496 aaKnown RBP11.61□□□□□ -0.55
VCX3A-201ENST00000381089 SURF2Q15527 256 aaPredicted RBP11.61□□□□□ -0.55
VCX3A-201ENST00000381089 TRPT1Q86TN4 253 aaKnown RBP11.61□□□□□ -0.55
VCX3A-201ENST00000381089 CCDC71LQ8N9Z2 235 aa11.61□□□□□ -0.55
VCX3A-201ENST00000381089 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
VCX3A-201ENST00000381089 ZNF486Q96H40 463 aaPredicted RBP11.61□□□□□ -0.55
VCX3A-201ENST00000381089 GRAMD2BQ96HH9 432 aa11.61□□□□□ -0.55
VCX3A-201ENST00000381089 SEC22AQ96IW7 307 aa11.61□□□□□ -0.55
VCX3A-201ENST00000381089 METTL26Q96S19 204 aa11.61□□□□□ -0.55
VCX3A-201ENST00000381089 RTBDNQ9BSG5 229 aaPredicted RBP11.61□□□□□ -0.55
VCX3A-201ENST00000381089 ZFAND3Q9H8U3 227 aa11.61□□□□□ -0.55
VCX3A-201ENST00000381089 GPR132Q9UNW8 380 aa11.61□□□□□ -0.55
VCX3A-201ENST00000381089 RYR1P21817 5038 aa11.61□□□□□ -0.55
VCX3A-201ENST00000381089 ZNF705EA8MWA4 302 aaPredicted RBP11.6□□□□□ -0.55
VCX3A-201ENST00000381089 NDUFB6O95139 128 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 P0DMU3 169 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 FAM231AP0DMU4 169 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 FAM231CP0DMU5 169 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 MED14OSP0DP75 135 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 RND3P61587 244 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 ASAH1Q13510 395 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 MZT2BQ6NZ67 158 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 LILRB2Q8N423 598 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 FAM24BQ8N5W8 94 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 SLC35G3Q8N808 338 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 SCGB3A2Q96PL1 93 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 PDCD10Q9BUL8 212 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 FLVCR2Q9UPI3 526 aa11.6□□□□□ -0.55
VCX3A-201ENST00000381089 TEX13DA0A0J9YY54 714 aaPredicted RBP11.59□□□□□ -0.55
VCX3A-201ENST00000381089 AKR1C4P17516 323 aa11.59□□□□□ -0.55
VCX3A-201ENST00000381089 SP6Q3SY56 376 aa11.59□□□□□ -0.55
VCX3A-201ENST00000381089 SLC25A21Q9BQT8 299 aaPredicted RBP11.59□□□□□ -0.55
VCX3A-201ENST00000381089 DEFB131BA0A096LNP1 70 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 FAM240BA0A1B0GVZ2 78 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 K7EQG2 157 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 TMEM50AO95807 157 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 AMBPP02760 352 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 ZNF688P0C7X2 276 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 P2RY1P47900 373 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 DEFA1P59665 94 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 DEFA3P59666 94 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 ENKURQ8TC29 256 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 TMEM230Q96A57 120 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 TP53RKQ96S44 253 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 NAA60Q9H7X0 242 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 FAT2Q9NYQ8 4349 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 PKHD1P08F94 4074 aa11.58□□□□□ -0.56
VCX3A-201ENST00000381089 TRAV6A0A075B6T7 132 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 C3orf85A0A1B0GTC6 90 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 A0A1B0GU03 582 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 CRYM-AS1A6NIL9 109 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 KNCNA6PVL3 124 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 ATG12O94817 140 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 IFNA17P01571 189 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 GIG44P09565 113 aaPredicted RBP11.57□□□□□ -0.56
VCX3A-201ENST00000381089 OR5AC1P0C628 307 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 ANXA7P20073 488 aaKnown RBP11.57□□□□□ -0.56
VCX3A-201ENST00000381089 C4BPBP20851 252 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 NPY1RP25929 384 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 NUTF2P61970 127 aaKnown RBP11.57□□□□□ -0.56
VCX3A-201ENST00000381089 ACTL10Q5JWF8 245 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 POM121L12Q8N7R1 296 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 NDUFAF3Q9BU61 184 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 C1QTNF4Q9BXJ3 329 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 C20orf85Q9H1P6 137 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 ENY2Q9NPA8 101 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 PRR13Q9NZ81 148 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 X6R8D5 127 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 DNAH2Q9P225 4427 aa11.57□□□□□ -0.56
VCX3A-201ENST00000381089 ELOA3CA0A087WX78 387 aaPredicted RBP11.56□□□□□ -0.56
VCX3A-201ENST00000381089 HELTA6NFD8 242 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 PRSS29PA6NIE9 313 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 INS-IGF2F8WCM5 200 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 CLN5O75503 358 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 IGKV1-39P01597 117 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms