RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 ODF3BA8MYP8 253 aa6.18□□□□□ -1.42
CDKL5-202ENST00000379996 CT45A6P0DMU7 189 aa6.18□□□□□ -1.42
CDKL5-202ENST00000379996 CT45A5P0DMU8 189 aa6.18□□□□□ -1.42
CDKL5-202ENST00000379996 CT45A7P0DMV0 189 aa6.18□□□□□ -1.42
CDKL5-202ENST00000379996 MALP21145 153 aa6.18□□□□□ -1.42
CDKL5-202ENST00000379996 GCHFRP30047 84 aa6.18□□□□□ -1.42
CDKL5-202ENST00000379996 EDDM3AQ14507 147 aa6.18□□□□□ -1.42
CDKL5-202ENST00000379996 HLA-DRB5Q30154 266 aa6.18□□□□□ -1.42
CDKL5-202ENST00000379996 OR4S2Q8NH73 311 aa6.18□□□□□ -1.42
CDKL5-202ENST00000379996 IGF2BP2-AS1Q96M15 143 aa6.18□□□□□ -1.42
CDKL5-202ENST00000379996 CR1P17927 2039 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 KIR2DL5BA0A0G2JN68 375 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 KIR2DL5BA0A0G2JPC4 375 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 GCGP01275 180 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 BPIFB3P59826 476 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 PRCDQ00LT1 54 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 PRAMEF5Q5TYX0 476 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 KIR2DL5AQ8N109 375 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 OCC1Q8TAD7 63 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 LEAP2Q969E1 77 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 RAX2Q96IS3 184 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 TMEM133Q9H2Q1 129 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 FUT9Q9Y231 359 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 V9GYV3 84 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 SPTBN1Q01082 2364 aaKnown RBP6.17□□□□□ -1.42
CDKL5-202ENST00000379996 PPP5D1E7EU14 171 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 CA2P00918 260 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 MSMBP08118 114 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 THBS3P49746 956 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 COMPP49747 757 aaPredicted RBP6.17□□□□□ -1.42
CDKL5-202ENST00000379996 Q8N1Y9 231 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 SSBP4Q9BWG4 385 aaPredicted RBP6.17□□□□□ -1.42
CDKL5-202ENST00000379996 NPVFQ9HCQ7 196 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 TMEM160Q9NX00 188 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 HELZ2Q9BYK8 2649 aaKnown RBP6.17□□□□□ -1.42
CDKL5-202ENST00000379996 ICE1Q9Y2F5 2266 aa6.17□□□□□ -1.42
CDKL5-202ENST00000379996 A0A1W2PPQ1 181 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 IGLV1-47P01700 117 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 OR5G3P0C626 314 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 HSPE1P61604 102 aaKnown RBP6.16□□□□□ -1.42
CDKL5-202ENST00000379996 RPP30P78346 268 aaKnown RBP6.16□□□□□ -1.42
CDKL5-202ENST00000379996 HCP5Q6MZN7 132 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 SLC24A4Q8NFF2 622 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 AKAP9Q99996 3911 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 A0A1B0GUS0 222 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 LY6LH3BQJ8 138 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 UPK2O00526 184 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 FSHBP01225 129 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 IGKV1-16P04430 117 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 IGHV4-31P0DP07 118 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 C2orf83Q53S99 150 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 FAM78BQ5VT40 261 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 RNF152Q8N8N0 203 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 OR4A16Q8NH70 328 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 OR9G1Q8NH87 305 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 H1FXQ92522 213 aaKnown RBP6.16□□□□□ -1.42
CDKL5-202ENST00000379996 S1PR3Q99500 378 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 C2orf88Q9BSF0 95 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 BET1LQ9NYM9 111 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 TBL2Q9Y4P3 447 aaKnown RBP6.16□□□□□ -1.42
CDKL5-202ENST00000379996 UTP20O75691 2785 aaKnown RBP6.16□□□□□ -1.42
CDKL5-202ENST00000379996 OOSP1A8MZH6 123 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 CHRNA7P36544 502 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 CNN1P51911 297 aaKnown RBP6.16□□□□□ -1.42
CDKL5-202ENST00000379996 UBE2G2P60604 165 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 ZNF600Q6ZNG1 722 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 SSX9Q7RTT3 188 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 TEX29Q8N6K0 151 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 ZNF709Q8N972 641 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 Q8N976 141 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 FAM167A-AS1Q96KT0 104 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 Q96MF0 132 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 PFDN5Q99471 154 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 LRRK2Q5S007 2527 aa6.16□□□□□ -1.42
CDKL5-202ENST00000379996 LRBAP50851 2863 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 IGLV2-23P01705 113 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 FRMD6-AS1P0C7T7 363 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 RNASE2P10153 161 aaKnown RBP6.15□□□□□ -1.42
CDKL5-202ENST00000379996 NPY1RP25929 384 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 LTC4SQ16873 150 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 MINOS1Q5TGZ0 78 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 C9orf139Q6ZV77 190 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 MOB3BQ86TA1 216 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 OR1L8Q8NGR8 309 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 ST6GALNAC6Q969X2 333 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 OR5B12Q96R08 314 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 ZNRD1Q9P1U0 126 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 GNG12Q9UBI6 72 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 AMMECR1Q9Y4X0 333 aaPredicted RBP6.15□□□□□ -1.42
CDKL5-202ENST00000379996 MINOS1-NBL1R4GNA1 71 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 TEX50A0A1B0GTY4 177 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 GGTLC3B5MD39 225 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 J3QR06 171 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 CCL3L1P16619 93 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.42
CDKL5-202ENST00000379996 MIR17HGQ75NE6 70 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 TMEM256Q8N2U0 113 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 NOL4LQ96MY1 436 aaPredicted RBP6.15□□□□□ -1.42
CDKL5-202ENST00000379996 TBX15Q96SF7 602 aa6.15□□□□□ -1.42
CDKL5-202ENST00000379996 NDUFA4L2Q9NRX3 87 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms