RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 CENPVQ7Z7K6 275 aaPredicted RBP7.37□□□□□ -1.23
LIG3-202ENST00000378526 PLXND1Q9Y4D7 1925 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 hADV29S1A0JD25 119 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 CLPSL1A2RUU4 121 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 TCRAP04437 139 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 CCL5P13501 91 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 TRBV5-7A0A0A0MS05 114 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 K7ESM1 405 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 KIAA0040Q15053 153 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 IGHV2-26A0A0B4J1V2 119 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 AHRRA9YTQ3 701 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 NANOS3P60323 173 aaKnown RBP7.37□□□□□ -1.23
LIG3-202ENST00000378526 STPG4Q8N801 248 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 GFRA4Q9GZZ7 299 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 IDI2-AS1Q9NZ38 188 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 CELA3AP09093 270 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 CLLU1OSQ5K130 101 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 UNQ9370/PRO34162Q6UXP9 181 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 OCC1Q8TAD7 63 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 Q96M66 194 aa7.37□□□□□ -1.23
LIG3-202ENST00000378526 PLCH1Q4KWH8 1693 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 RNF222A6NCQ9 220 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 WNK1Q9H4A3 2382 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 IGHV3-64A0A075B6Q5 118 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 IGHV2-70DA0A0C4DH43 119 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 K7ERS5 55 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 DXOO77932 396 aaKnown RBP7.36□□□□□ -1.23
LIG3-202ENST00000378526 CCL2P13500 99 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 HERV-K104P63124 156 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 BHLHA9Q7RTU4 235 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 OSR1Q8TAX0 266 aaPredicted RBP7.36□□□□□ -1.23
LIG3-202ENST00000378526 CD7P09564 240 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 PRSS41Q7RTY9 318 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 REG1BP48304 166 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 SPTSSBQ8NFR3 76 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 SMIM14Q96QK8 99 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 FAM236AA0A1B0GUQ0 79 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 FAM236BA0A1B0GV22 79 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 NDUFC2-KCTD14E9PQ53 114 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 IGFBP3P17936 291 aaPredicted RBP7.36□□□□□ -1.23
LIG3-202ENST00000378526 DAD1P61803 113 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 TIMM23O14925 209 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 QSER1Q2KHR3 1735 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 BTAF1O14981 1849 aa7.36□□□□□ -1.23
LIG3-202ENST00000378526 LYRM9A8MSI8 78 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 FAM27BQ5VT28 67 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 NUP35Q8NFH5 326 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 CARD19Q96LW7 228 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 DOT1LQ8TEK3 1739 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 H3BMG7 143 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 TFF3Q07654 80 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 ZC2HC1BQ5TFG8 222 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 PILRBQ9UKJ0 227 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 ALKAL1Q6UXT8 129 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 C8orf44Q96CB5 159 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 FAM117AQ9C073 453 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 PLXNA2O75051 1894 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 RALGAPA2Q2PPJ7 1873 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 A0A0B4J2C4 111 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 C9orf172C9J069 976 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 TMEM240Q5SV17 173 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 LINC01551Q86U37 167 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 CLEC7AQ9BXN2 247 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 SPTAN1Q13813 2472 aaKnown RBP7.35□□□□□ -1.23
LIG3-202ENST00000378526 TRGV2A0A075B6R0 118 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 TRAV26-1A0A087WT03 109 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 SIGLEC8Q9NYZ4 499 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 YPEL1O60688 119 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 ACP7Q6ZNF0 438 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 TMEM141Q96I45 108 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 PYYP10082 97 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 ERCC8Q13216 396 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 KLF5Q13887 457 aaPredicted RBP7.35□□□□□ -1.23
LIG3-202ENST00000378526 ZNF525Q8N782 197 aa7.35□□□□□ -1.23
LIG3-202ENST00000378526 RBBP6Q7Z6E9 1792 aaKnown RBP7.35□□□□□ -1.23
LIG3-202ENST00000378526 TRAV14DV4A0A0A6YYC5 116 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 TM4SF5O14894 197 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 PDE6HQ13956 83 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 BVES-AS1Q5T3Y7 98 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 PVRIGQ6DKI7 326 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 LCN12Q6JVE5 192 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 NRAPQ86VF7 1730 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 A0A1B0GTI1 187 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 THBDP07204 575 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 SRSF3P84103 164 aaKnown RBP7.34□□□□□ -1.23
LIG3-202ENST00000378526 SORL1Q92673 2214 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 TRGV8A0A0C4DH27 118 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 IGLC2P0DOY2 106 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 IGLC3P0DOY3 106 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 PSMB8P28062 276 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 C1orf195Q5TG92 126 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 LY6G5BQ8NDX9 201 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 MYOD1P15172 320 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 VEGFBP49765 207 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 TMEM256Q8N2U0 113 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 ATRXP46100 2492 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 IGHV2OR16-5A0A0B4J2B6 119 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 GREM1O60565 184 aa7.34□□□□□ -1.23
LIG3-202ENST00000378526 PRIMA1Q86XR5 153 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms