RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 MBD3L5A6NJ08 208 aaPredicted RBP12.46□□□□□ -0.41
NPHP4-201ENST00000378156 HAX1O00165 279 aa12.46□□□□□ -0.41
NPHP4-201ENST00000378156 UPK2O00526 184 aa12.46□□□□□ -0.41
NPHP4-201ENST00000378156 TGFAP01135 160 aa12.46□□□□□ -0.41
NPHP4-201ENST00000378156 ADCYAP1P18509 176 aa12.46□□□□□ -0.41
NPHP4-201ENST00000378156 NMSQ5H8A3 153 aa12.46□□□□□ -0.41
NPHP4-201ENST00000378156 HEPN1Q6WQI6 88 aa12.46□□□□□ -0.41
NPHP4-201ENST00000378156 MBD3L2Q8NHZ7 208 aaPredicted RBP12.46□□□□□ -0.41
NPHP4-201ENST00000378156 C21orf62Q9NYP8 219 aa12.46□□□□□ -0.41
NPHP4-201ENST00000378156 PEX7O00628 323 aa12.46□□□□□ -0.41
NPHP4-201ENST00000378156 GPR183P32249 361 aa12.46□□□□□ -0.41
NPHP4-201ENST00000378156 S4R3C0 116 aa12.46□□□□□ -0.41
NPHP4-201ENST00000378156 PSPNO60542 156 aa12.46□□□□□ -0.42
NPHP4-201ENST00000378156 THBDP07204 575 aa12.46□□□□□ -0.42
NPHP4-201ENST00000378156 FOXL2NBQ6ZUU3 175 aa12.46□□□□□ -0.42
NPHP4-201ENST00000378156 RNASEH2CQ8TDP1 164 aaKnown RBP12.46□□□□□ -0.42
NPHP4-201ENST00000378156 TICRRQ7Z2Z1 1910 aa12.46□□□□□ -0.42
NPHP4-201ENST00000378156 PLXNB3Q9ULL4 1909 aa12.46□□□□□ -0.42
NPHP4-201ENST00000378156 TRAV9-2A0A087WT02 112 aa12.46□□□□□ -0.42
NPHP4-201ENST00000378156 DUTP33316 252 aaKnown RBP12.46□□□□□ -0.42
NPHP4-201ENST00000378156 C1QL4Q86Z23 238 aa12.46□□□□□ -0.42
NPHP4-201ENST00000378156 PRB3Q04118 309 aaPredicted RBP12.45□□□□□ -0.42
NPHP4-201ENST00000378156 ARPC1AQ92747 370 aa12.45□□□□□ -0.42
NPHP4-201ENST00000378156 KLK15Q9H2R5 256 aa12.45□□□□□ -0.42
NPHP4-201ENST00000378156 RPP21Q9H633 154 aaKnown RBP12.45□□□□□ -0.42
NPHP4-201ENST00000378156 GEMIN7Q9H840 131 aaKnown RBP12.45□□□□□ -0.42
NPHP4-201ENST00000378156 FOXA2Q9Y261 457 aaPredicted RBP12.45□□□□□ -0.42
NPHP4-201ENST00000378156 ETV2O00321 342 aaPredicted RBP12.45□□□□□ -0.42
NPHP4-201ENST00000378156 FBLN7Q53RD9 439 aa12.45□□□□□ -0.42
NPHP4-201ENST00000378156 PPP1R27Q86WC6 154 aa12.45□□□□□ -0.42
NPHP4-201ENST00000378156 ST6GALNAC3Q8NDV1 305 aa12.45□□□□□ -0.42
NPHP4-201ENST00000378156 OR4X2Q8NGF9 303 aa12.45□□□□□ -0.42
NPHP4-201ENST00000378156 TRBV24-1A0A075B6N3 115 aa12.45□□□□□ -0.42
NPHP4-201ENST00000378156 OR5A1Q8NGJ0 315 aa12.45□□□□□ -0.42
NPHP4-201ENST00000378156 MOB4Q9Y3A3 225 aa12.45□□□□□ -0.42
NPHP4-201ENST00000378156 HS3ST6Q96QI5 342 aa12.45□□□□□ -0.42
NPHP4-201ENST00000378156 UBE2L6O14933 153 aa12.44□□□□□ -0.42
NPHP4-201ENST00000378156 SMAD7O15105 426 aaKnown RBP12.44□□□□□ -0.42
NPHP4-201ENST00000378156 GCSAMLQ5JQS6 135 aa12.44□□□□□ -0.42
NPHP4-201ENST00000378156 TMEM144Q7Z5S9 345 aa12.44□□□□□ -0.42
NPHP4-201ENST00000378156 DDB2Q92466 427 aa12.44□□□□□ -0.42
NPHP4-201ENST00000378156 FMC1Q96HJ9 113 aa12.44□□□□□ -0.42
NPHP4-201ENST00000378156 SELLP14151 372 aa12.44□□□□□ -0.42
NPHP4-201ENST00000378156 SRSF7Q16629 238 aaKnown RBP eCLIP12.44□□□□□ -0.42
NPHP4-201ENST00000378156 MEIG1Q5JSS6 88 aa12.44□□□□□ -0.42
NPHP4-201ENST00000378156 HIST1H2BLQ99880 126 aa12.44□□□□□ -0.42
NPHP4-201ENST00000378156 TSPOP30536 169 aa12.44□□□□□ -0.42
NPHP4-201ENST00000378156 RPUSD1Q9UJJ7 312 aaKnown RBP12.44□□□□□ -0.42
NPHP4-201ENST00000378156 C15orf61A6NNL5 157 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 NBR2O15453 112 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 CA1P00915 261 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-201ENST00000378156 IGKV1-5P01602 117 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 LYL1P12980 280 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 CIARTQ8N365 385 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-201ENST00000378156 ZNF257Q9Y2Q1 563 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 ZNF672Q499Z4 452 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-201ENST00000378156 MIR17HGQ75NE6 70 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 FAM19A2Q8N3H0 131 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 BEX4Q9NWD9 120 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-201ENST00000378156 A0A0G2JLM5 398 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 IGHV3-23P01764 117 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 GPX1P07203 203 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 OR9G9P0C7N8 305 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 A0A0G2JNJ9 132 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 ORMDL3Q8N138 153 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 ZNF418Q8TF45 676 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-201ENST00000378156 OSTCQ9NRP0 149 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 Q9UFV3 132 aa12.43□□□□□ -0.42
NPHP4-201ENST00000378156 IGHV3-49A0A0A0MS15 119 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 H3BUT2 72 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 ST6GALNAC6Q969X2 333 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 DMRTA2Q96SC8 542 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 PGPEP1LA6NFU8 196 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 C1QTNF9P0C862 333 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 TMEM170BQ5T4T1 132 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 HIST3H2BBQ8N257 126 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 MBD3L1Q8WWY6 194 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 C18orf15Q96N68 181 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 CXCL1P09341 107 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 MST1LQ2TV78 715 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 C20orf204Q6ZNR8 217 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 OR52E5Q8NH55 327 aa12.42□□□□□ -0.42
NPHP4-201ENST00000378156 A0A0G2JRQ6 117 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 WIPF3A6NGB9 483 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 C9JQL5 133 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 OR10J3Q5JRS4 329 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 LRRK1Q38SD2 2015 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 CD24P25063 80 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 ASCL4Q6XD76 172 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 BEND2Q8NDZ0 799 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 SNAI2O43623 268 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 TNFSF13O75888 250 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 SEC11AP67812 179 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 GNB1LQ9BYB4 327 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 MSRB2Q9Y3D2 182 aa12.41□□□□□ -0.42
NPHP4-201ENST00000378156 ADMP35318 185 aa12.4□□□□□ -0.42
NPHP4-201ENST00000378156 SNRPD3P62318 126 aaKnown RBP12.4□□□□□ -0.42
NPHP4-201ENST00000378156 ZNF474Q6S9Z5 364 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-201ENST00000378156 TNFRSF14Q92956 283 aa12.4□□□□□ -0.42
NPHP4-201ENST00000378156 FOXC2Q99958 501 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms