RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 FXYD5Q96DB9 178 aa8.79□□□□□ -1
BEST1-201ENST00000378043 AMMECR1Q9Y4X0 333 aaPredicted RBP8.79□□□□□ -1
BEST1-201ENST00000378043 C22orf46C9J442 243 aa8.79□□□□□ -1
BEST1-201ENST00000378043 COX7A2P2O60397 106 aa8.79□□□□□ -1
BEST1-201ENST00000378043 MFAP2P55001 183 aa8.79□□□□□ -1
BEST1-201ENST00000378043 ZNF329Q86UD4 541 aa8.79□□□□□ -1
BEST1-201ENST00000378043 TGIF2LXQ8IUE1 241 aa8.79□□□□□ -1
BEST1-201ENST00000378043 RCHY1Q96PM5 261 aa8.79□□□□□ -1
BEST1-201ENST00000378043 RNF2Q99496 336 aa8.79□□□□□ -1
BEST1-201ENST00000378043 PAXXQ9BUH6 204 aa8.79□□□□□ -1
BEST1-201ENST00000378043 SNHG12Q9BXW3 62 aa8.79□□□□□ -1
BEST1-201ENST00000378043 TLN1Q9Y490 2541 aaKnown RBP8.79□□□□□ -1
BEST1-201ENST00000378043 SPTA1P02549 2419 aa8.78□□□□□ -1
BEST1-201ENST00000378043 IGHV3-72A0A0B4J1Y9 119 aa8.78□□□□□ -1
BEST1-201ENST00000378043 TRAV34A0A0B4J273 112 aa8.78□□□□□ -1
BEST1-201ENST00000378043 IGLC7A0M8Q6 106 aa8.78□□□□□ -1
BEST1-201ENST00000378043 ZNF705FA8MVS1 300 aaPredicted RBP8.78□□□□□ -1
BEST1-201ENST00000378043 SHISA9B4DS77 424 aa8.78□□□□□ -1
BEST1-201ENST00000378043 PLAUP00749 431 aa8.78□□□□□ -1
BEST1-201ENST00000378043 MT-ND6P03923 174 aa8.78□□□□□ -1
BEST1-201ENST00000378043 ZNF705DP0CH99 300 aaPredicted RBP8.78□□□□□ -1
BEST1-201ENST00000378043 ZNF705BP0CI00 300 aaPredicted RBP8.78□□□□□ -1
BEST1-201ENST00000378043 IGHV1-8P0DP01 117 aa8.78□□□□□ -1
BEST1-201ENST00000378043 USF2Q15853 346 aaPredicted RBP8.78□□□□□ -1
BEST1-201ENST00000378043 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
BEST1-201ENST00000378043 TEX43Q6ZNM6 134 aa8.78□□□□□ -1
BEST1-201ENST00000378043 C19orf35Q6ZS72 473 aa8.78□□□□□ -1
BEST1-201ENST00000378043 SSBP3Q9BWW4 388 aaPredicted RBP8.78□□□□□ -1
BEST1-201ENST00000378043 KAAG1Q9UBP8 84 aa8.78□□□□□ -1
BEST1-201ENST00000378043 E7EQL1 145 aa8.78□□□□□ -1
BEST1-201ENST00000378043 BMPR1BO00238 502 aa8.78□□□□□ -1
BEST1-201ENST00000378043 MYCNOSP40205 109 aa8.78□□□□□ -1
BEST1-201ENST00000378043 WDR73Q6P4I2 378 aa8.78□□□□□ -1
BEST1-201ENST00000378043 TOMM20LQ6UXN7 152 aa8.78□□□□□ -1
BEST1-201ENST00000378043 LHFPL4Q7Z7J7 247 aa8.78□□□□□ -1
BEST1-201ENST00000378043 MBD6Q96DN6 1003 aa8.78□□□□□ -1
BEST1-201ENST00000378043 SERTAD4Q9NUC0 356 aa8.78□□□□□ -1
BEST1-201ENST00000378043 GPX1P07203 203 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 CRYGCP07315 174 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 PRB3Q04118 309 aaPredicted RBP8.77□□□□□ -1.01
BEST1-201ENST00000378043 LINC00305Q7Z4B0 112 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 MUC6Q6W4X9 2439 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 PEX7O00628 323 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 MOSP00540 346 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 CNTFRP26992 372 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 SUB1P53999 127 aaKnown RBP eCLIP8.77□□□□□ -1.01
BEST1-201ENST00000378043 SSTP61278 116 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 PVRIGQ6DKI7 326 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 HCP5Q6MZN7 132 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 GFRALQ6UXV0 394 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 ZNF841Q6ZN19 808 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 PRSS33Q8NF86 280 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 OR1L4Q8NGR5 311 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 FBXL7Q9UJT9 491 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 ZNF835Q9Y2P0 537 aa8.77□□□□□ -1.01
BEST1-201ENST00000378043 AMY1AP04745 511 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 MC5RP33032 325 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 GNG5P63218 68 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 VMA21Q3ZAQ7 101 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 PRR30Q53SZ7 412 aaPredicted RBP8.76□□□□□ -1.01
BEST1-201ENST00000378043 OR10J3Q5JRS4 329 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 ASCL5Q7RTU5 278 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 Q8N976 141 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 SAMD10Q9BYL1 202 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 C7orf69Q9H7B7 122 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 A0A1W2PS18 150 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 IZUMO1RA6ND01 250 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 ENSAO43768 121 aaKnown RBP8.76□□□□□ -1.01
BEST1-201ENST00000378043 APELAP0DMC3 54 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 SRIP30626 198 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 BRS3P32247 399 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 BPIFB3P59826 476 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 SLAQ13239 276 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 VN1R17PQ8TDU5 208 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 TMEM133Q9H2Q1 129 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 ABCA4P78363 2273 aa8.76□□□□□ -1.01
BEST1-201ENST00000378043 HLA-DQA1P01909 254 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 LGALS7P47929 136 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 COX19Q49B96 90 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 GDF5OSQ5U4N7 250 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 FAM231DQ6ZW35 169 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 NUDT10Q8NFP7 164 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 NUDT11Q96G61 164 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 TNFRSF19Q9NS68 423 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 VWC2LB2RUY7 222 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 CRYGBP07316 175 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 ORM2P19652 201 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 RAB4AP20338 218 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 NUTF2P61970 127 aaKnown RBP8.75□□□□□ -1.01
BEST1-201ENST00000378043 RPL19P84098 196 aaKnown RBP8.75□□□□□ -1.01
BEST1-201ENST00000378043 C20orf144Q9BQM9 153 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 ATG101Q9BSB4 218 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 FAM103A1Q9BTL3 118 aaKnown RBP8.75□□□□□ -1.01
BEST1-201ENST00000378043 DYNLRB1Q9NP97 96 aa8.75□□□□□ -1.01
BEST1-201ENST00000378043 TBL2Q9Y4P3 447 aaKnown RBP8.75□□□□□ -1.01
BEST1-201ENST00000378043 IGHV1-69-2A0A0G2JMI3 117 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 ZNF253O75346 499 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 IGLV1-47P01700 117 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 SIGLECL1Q8N7X8 197 aa8.74□□□□□ -1.01
BEST1-201ENST00000378043 NUP35Q8NFH5 326 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms