RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 DUXBA0A1W2PPF3 345 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 NAP1L6A6NFF2 107 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 DNASE2O00115 360 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 HOXB5P09067 269 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 IAPPP10997 89 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 SLC25A4P12235 298 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 RPL35AP18077 110 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 NPPCP23582 126 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 OR10J1P30954 320 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 PAFAH1B2P68402 229 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 PRSS54Q6PEW0 395 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 OR1S2Q8NGQ3 325 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 NPIPB3Q92617 1050 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 TMEM231Q9H6L2 316 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 HSPB7Q9UBY9 170 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 U3KQ87 197 aa8.62□□□□□ -1.03
SMARCE1-203ENST00000377808 DFFBO76075 338 aa8.61□□□□□ -1.03
SMARCE1-203ENST00000377808 NDUFB6O95139 128 aa8.61□□□□□ -1.03
SMARCE1-203ENST00000377808 ODF3L2Q3SX64 289 aa8.61□□□□□ -1.03
SMARCE1-203ENST00000377808 APRG1Q8IVJ8 170 aa8.61□□□□□ -1.03
SMARCE1-203ENST00000377808 Q8WTZ3 238 aa8.61□□□□□ -1.03
SMARCE1-203ENST00000377808 TMEM170AQ8WVE7 144 aa8.61□□□□□ -1.03
SMARCE1-203ENST00000377808 RABAC1Q9UI14 185 aa8.61□□□□□ -1.03
SMARCE1-203ENST00000377808 FLVCR2Q9UPI3 526 aa8.61□□□□□ -1.03
SMARCE1-203ENST00000377808 A0A1W2PS18 150 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 IGKV1-17P01599 117 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 IGLC1P0CG04 106 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 IL7P13232 177 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 APOC4P55056 127 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 ZNF124Q15973 351 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 C4orf46Q504U0 113 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 CASC10Q5T4H9 136 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 LRTM2Q8N967 370 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 STXBP6Q8NFX7 210 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 COQ8AQ8NI60 647 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 SLC35E1Q96K37 410 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 SDHCQ99643 169 aaPredicted RBP8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 MAGT1Q9H0U3 335 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 MS4A6AQ9H2W1 248 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 VSIRQ9H7M9 311 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 TMED3Q9Y3Q3 217 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 STARD9Q9P2P6 4700 aa8.6□□□□□ -1.03
SMARCE1-203ENST00000377808 MED6O75586 246 aa8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 IL4P05112 153 aa8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 CD5P06127 495 aa8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 ANXA7P20073 488 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 P2RY1P47900 373 aa8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 CMC4P56277 68 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 UBE2MP61081 183 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 RAB11AP62491 216 aa8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 GGNBP1Q5YKI7 109 aa8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 LILRB2Q8N423 598 aa8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 GRAMD2BQ96HH9 432 aa8.59□□□□□ -1.03
SMARCE1-203ENST00000377808 C9orf170A2RU37 121 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 ZFP92A6NM28 416 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 WRBO00258 174 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 PITX3O75364 302 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 ADAP1O75689 374 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 HNRNPCP07910 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 OR4E1P0C645 316 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 RD3LP0DJH9 198 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 RPP30P78346 268 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 DEFB135Q30KP9 77 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 FAM90A2PQ658T7 463 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 STPG3Q8N7X2 389 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 C7orf50Q9BRJ6 194 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 PBDC1Q9BVG4 233 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 MAP6D1Q9H9H5 199 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
SMARCE1-203ENST00000377808 RYR3Q15413 4870 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 FAM90A26D6RGX4 464 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 H3BP45 60 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 SYNGR2O43760 224 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 TOMM40O96008 361 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 IFNA21P01568 189 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 SLC25A6P12236 298 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 CRYBB3P26998 211 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 BTCP35070 178 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 EIF2B2P49770 351 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 DEFB131AP59861 70 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 YPEL3P61236 119 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 DHRS2Q13268 280 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 SPANXN5Q5MJ07 72 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 LEMD1Q68G75 181 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 LYG2Q86SG7 212 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 CIB3Q96Q77 187 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 OVOL2Q9BRP0 275 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 TENM3Q9P273 2699 aa8.57□□□□□ -1.04
SMARCE1-203ENST00000377808 LYRM1O43325 122 aa8.56□□□□□ -1.04
SMARCE1-203ENST00000377808 SPRY2O43597 315 aa8.56□□□□□ -1.04
SMARCE1-203ENST00000377808 SCGB1D2O95969 90 aa8.56□□□□□ -1.04
SMARCE1-203ENST00000377808 PSG1P11464 419 aa8.56□□□□□ -1.04
SMARCE1-203ENST00000377808 GPX4P36969 197 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-203ENST00000377808 ATP5IP56385 69 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-203ENST00000377808 GAMTQ14353 236 aa8.56□□□□□ -1.04
SMARCE1-203ENST00000377808 USF2Q15853 346 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-203ENST00000377808 FAM24BQ8N5W8 94 aa8.56□□□□□ -1.04
SMARCE1-203ENST00000377808 OR51G1Q8NGK1 321 aa8.56□□□□□ -1.04
SMARCE1-203ENST00000377808 C20orf85Q9H1P6 137 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms