RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 RBMS2Q15434 407 aaKnown RBP13.09□□□□□ -0.31
COMMD6-202ENST00000377612 LYZL2Q7Z4W2 148 aa13.09□□□□□ -0.31
COMMD6-202ENST00000377612 TRAV2A0A0B4J234 112 aa13.08□□□□□ -0.32
COMMD6-202ENST00000377612 K7EQG2 157 aa13.08□□□□□ -0.32
COMMD6-202ENST00000377612 SULT1A3P0DMM9 295 aa13.08□□□□□ -0.32
COMMD6-202ENST00000377612 SULT1A4P0DMN0 295 aa13.08□□□□□ -0.32
COMMD6-202ENST00000377612 AKR1C4P17516 323 aa13.08□□□□□ -0.32
COMMD6-202ENST00000377612 NPY1RP25929 384 aa13.08□□□□□ -0.32
COMMD6-202ENST00000377612 USF2Q15853 346 aaPredicted RBP13.08□□□□□ -0.32
COMMD6-202ENST00000377612 METTL26Q96S19 204 aa13.08□□□□□ -0.32
COMMD6-202ENST00000377612 RBM38Q9H0Z9 239 aaKnown RBP13.08□□□□□ -0.32
COMMD6-202ENST00000377612 HSPB7Q9UBY9 170 aa13.08□□□□□ -0.32
COMMD6-202ENST00000377612 SCP2D1Q9UJQ7 156 aa13.08□□□□□ -0.32
COMMD6-202ENST00000377612 U3KQE9 123 aa13.08□□□□□ -0.32
COMMD6-202ENST00000377612 A0A0B4J2A0 478 aa13.07□□□□□ -0.32
COMMD6-202ENST00000377612 RPS10-NUDT3A0A1W2PQS6 291 aa13.07□□□□□ -0.32
COMMD6-202ENST00000377612 CXorf65A6NEN9 183 aa13.07□□□□□ -0.32
COMMD6-202ENST00000377612 NPPCP23582 126 aa13.07□□□□□ -0.32
COMMD6-202ENST00000377612 OR1S2Q8NGQ3 325 aa13.07□□□□□ -0.32
COMMD6-202ENST00000377612 RNASEH2CQ8TDP1 164 aaKnown RBP13.07□□□□□ -0.32
COMMD6-202ENST00000377612 LINC00476Q8WZB0 136 aa13.07□□□□□ -0.32
COMMD6-202ENST00000377612 CSTL1Q9H114 145 aa13.07□□□□□ -0.32
COMMD6-202ENST00000377612 SHPKQ9UHJ6 478 aa13.07□□□□□ -0.32
COMMD6-202ENST00000377612 MPTX1A8MV57 137 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 CD5P06127 495 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 OR10J1P30954 320 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 PAFAH1B2P68402 229 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 SMCO1Q147U7 214 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 STXBP6Q8NFX7 210 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 DCANP1Q8TF63 244 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 GLMPQ8WWB7 406 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 RBKSQ9H477 322 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 TMEM231Q9H6L2 316 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 RABAC1Q9UI14 185 aa13.06□□□□□ -0.32
COMMD6-202ENST00000377612 DNASE2O00115 360 aaPredicted RBP13.05□□□□□ -0.32
COMMD6-202ENST00000377612 CA1P00915 261 aaPredicted RBP13.05□□□□□ -0.32
COMMD6-202ENST00000377612 GIG44P09565 113 aaPredicted RBP13.05□□□□□ -0.32
COMMD6-202ENST00000377612 ZNF688P0C7X2 276 aa13.05□□□□□ -0.32
COMMD6-202ENST00000377612 SLC25A4P12235 298 aa13.05□□□□□ -0.32
COMMD6-202ENST00000377612 ATF4P18848 351 aaPredicted RBP13.05□□□□□ -0.32
COMMD6-202ENST00000377612 C4BPBP20851 252 aa13.05□□□□□ -0.32
COMMD6-202ENST00000377612 CMC4P56277 68 aaPredicted RBP13.05□□□□□ -0.32
COMMD6-202ENST00000377612 RPL11P62913 178 aaKnown RBP13.05□□□□□ -0.32
COMMD6-202ENST00000377612 DTD1Q8TEA8 209 aa13.05□□□□□ -0.32
COMMD6-202ENST00000377612 NPIPB3Q92617 1050 aa13.05□□□□□ -0.32
COMMD6-202ENST00000377612 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
COMMD6-202ENST00000377612 CCR6P51684 374 aa13.04□□□□□ -0.32
COMMD6-202ENST00000377612 YPEL3P61236 119 aaPredicted RBP13.04□□□□□ -0.32
COMMD6-202ENST00000377612 TMED4Q7Z7H5 227 aa13.04□□□□□ -0.32
COMMD6-202ENST00000377612 TRPT1Q86TN4 253 aaKnown RBP13.04□□□□□ -0.32
COMMD6-202ENST00000377612 ACY3Q96HD9 319 aa13.04□□□□□ -0.32
COMMD6-202ENST00000377612 KCNIP3Q9Y2W7 256 aa13.04□□□□□ -0.32
COMMD6-202ENST00000377612 A0A1W2PS18 150 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 NUPR2A6NF83 97 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 KNCNA6PVL3 124 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 PITX3O75364 302 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 HNRNPCP07910 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
COMMD6-202ENST00000377612 PYDC2Q56P42 97 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 CEMP1Q6PRD7 247 aaPredicted RBP13.03□□□□□ -0.32
COMMD6-202ENST00000377612 C16orf54Q6UWD8 224 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 CCDC190Q86UF4 302 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 LGI3Q8N145 548 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 GATAD1Q8WUU5 269 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 GRAMD2BQ96HH9 432 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 SCGB3A2Q96PL1 93 aa13.03□□□□□ -0.32
COMMD6-202ENST00000377612 IGKV1D-37A0A075B6S9 117 aa13.02□□□□□ -0.33
COMMD6-202ENST00000377612 SCGB2A1O75556 95 aa13.02□□□□□ -0.33
COMMD6-202ENST00000377612 TOMM40O96008 361 aa13.02□□□□□ -0.33
COMMD6-202ENST00000377612 IFNA10P01566 189 aa13.02□□□□□ -0.33
COMMD6-202ENST00000377612 IL4P05112 153 aa13.02□□□□□ -0.33
COMMD6-202ENST00000377612 TOMM5Q8N4H5 51 aa13.02□□□□□ -0.33
COMMD6-202ENST00000377612 OR11H2Q8NH07 326 aa13.02□□□□□ -0.33
COMMD6-202ENST00000377612 RARRES2Q99969 163 aa13.02□□□□□ -0.33
COMMD6-202ENST00000377612 C11orf68Q9H3H3 251 aaKnown RBP13.02□□□□□ -0.33
COMMD6-202ENST00000377612 DEFB4AO15263 64 aa13.01□□□□□ -0.33
COMMD6-202ENST00000377612 SRPXP78539 464 aa13.01□□□□□ -0.33
COMMD6-202ENST00000377612 Q8WTZ3 238 aa13.01□□□□□ -0.33
COMMD6-202ENST00000377612 CCDC160A6NGH7 325 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 IAPPP10997 89 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 PSG1P11464 419 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 ANXA3P12429 323 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 FAUP35544 74 aaKnown RBP13□□□□□ -0.33
COMMD6-202ENST00000377612 NANOS2P60321 138 aaKnown RBP13□□□□□ -0.33
COMMD6-202ENST00000377612 PPP1R1AQ13522 171 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 ETFRF1Q6IPR1 90 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 LRTM2Q8N967 370 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 Q8NAQ8 132 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 OR51G1Q8NGK1 321 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 OR1S1Q8NH92 325 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 SRRQ9GZT4 340 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 U3KQ87 197 aa13□□□□□ -0.33
COMMD6-202ENST00000377612 DUXBA0A1W2PPF3 345 aa12.99□□□□□ -0.33
COMMD6-202ENST00000377612 BUB3O43684 328 aa12.99□□□□□ -0.33
COMMD6-202ENST00000377612 VAMP1P23763 118 aa12.99□□□□□ -0.33
COMMD6-202ENST00000377612 DHRS2Q13268 280 aa12.99□□□□□ -0.33
COMMD6-202ENST00000377612 TMEM128Q5BJH2 165 aa12.99□□□□□ -0.33
COMMD6-202ENST00000377612 STHQ8IWL8 128 aa12.99□□□□□ -0.33
COMMD6-202ENST00000377612 PHLDA1Q8WV24 401 aaPredicted RBP12.99□□□□□ -0.33
COMMD6-202ENST00000377612 NARS2Q96I59 477 aaKnown RBP12.99□□□□□ -0.33
COMMD6-202ENST00000377612 FAM90A26D6RGX4 464 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms