RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 TEX36Q5VZQ5 186 aa16.42■□□□□ 0.22
CLN5-201ENST00000377453 RBMXL3Q8N7X1 1067 aaKnown RBP16.42■□□□□ 0.22
CLN5-201ENST00000377453 SMIM27A0A1W2PRY6 76 aa16.42■□□□□ 0.22
CLN5-201ENST00000377453 TMEM183BQ1AE95 376 aa16.42■□□□□ 0.22
CLN5-201ENST00000377453 C10orf113Q5VZT2 155 aa16.42■□□□□ 0.22
CLN5-201ENST00000377453 LEMD1Q68G75 181 aa16.42■□□□□ 0.22
CLN5-201ENST00000377453 LCN12Q6JVE5 192 aa16.42■□□□□ 0.22
CLN5-201ENST00000377453 ZNF329Q86UD4 541 aa16.42■□□□□ 0.22
CLN5-201ENST00000377453 MIEN1Q9BRT3 115 aa16.42■□□□□ 0.22
CLN5-201ENST00000377453 ZZEF1O43149 2961 aa16.42■□□□□ 0.22
CLN5-201ENST00000377453 RELNP78509 3460 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 TM4SF5O14894 197 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 ENSAO43768 121 aaKnown RBP16.41■□□□□ 0.22
CLN5-201ENST00000377453 PRSS33Q8NF86 280 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 KCNS1Q96KK3 526 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 TMEM68Q96MH6 324 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 NKX6-3A6NJ46 265 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 CNTFRP26992 372 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 MFAP2P55001 183 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 Q71RC1 249 aaPredicted RBP16.41■□□□□ 0.22
CLN5-201ENST00000377453 OR5AN1Q8NGI8 311 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 ZNF586Q9NXT0 402 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 CTSZQ9UBR2 303 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 ACACAQ13085 2346 aa16.41■□□□□ 0.22
CLN5-201ENST00000377453 APCSP02743 223 aa16.4■□□□□ 0.22
CLN5-201ENST00000377453 CAMPP49913 170 aa16.4■□□□□ 0.22
CLN5-201ENST00000377453 BSPH1Q075Z2 132 aa16.4■□□□□ 0.22
CLN5-201ENST00000377453 NIT1Q86X76 327 aa16.4■□□□□ 0.22
CLN5-201ENST00000377453 OSR1Q8TAX0 266 aaPredicted RBP16.4■□□□□ 0.22
CLN5-201ENST00000377453 C20orf144Q9BQM9 153 aa16.4■□□□□ 0.22
CLN5-201ENST00000377453 TPRP12270 2363 aaKnown RBP16.4■□□□□ 0.22
CLN5-201ENST00000377453 GAL3ST2Q9H3Q3 398 aa16.4■□□□□ 0.22
CLN5-201ENST00000377453 A0A1W2PPI3 338 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 C17orf100A8MU93 164 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 VWC2LB2RUY7 222 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 C22orf46C9J442 243 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 IGLV2-23P01705 113 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 LINC00305Q7Z4B0 112 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 NUDT10Q8NFP7 164 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 TSKUQ8WUA8 353 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 NUDT11Q96G61 164 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 TRBV9A0A0B4J1U6 114 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 PEX7O00628 323 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 TOX4O94842 621 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 C3orf79P0CE67 100 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 WDR73Q6P4I2 378 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 OR1B1Q8NGR6 318 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 FXYD5Q96DB9 178 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 ARL2-SNX15V9GYD0 113 aa16.39■□□□□ 0.21
CLN5-201ENST00000377453 A0A0G2JNJ9 132 aa16.38■□□□□ 0.21
CLN5-201ENST00000377453 IZUMO1RA6ND01 250 aa16.38■□□□□ 0.21
CLN5-201ENST00000377453 Q6ZS92 163 aa16.38■□□□□ 0.21
CLN5-201ENST00000377453 NUP35Q8NFH5 326 aa16.38■□□□□ 0.21
CLN5-201ENST00000377453 Q9UFV3 132 aa16.38■□□□□ 0.21
CLN5-201ENST00000377453 APC2O95996 2303 aa16.38■□□□□ 0.21
CLN5-201ENST00000377453 ZNF324O75467 553 aaPredicted RBP16.38■□□□□ 0.21
CLN5-201ENST00000377453 SPATA45Q537H7 98 aa16.38■□□□□ 0.21
CLN5-201ENST00000377453 TMEM177Q53S58 311 aa16.38■□□□□ 0.21
CLN5-201ENST00000377453 IGFBPL1Q8WX77 278 aa16.38■□□□□ 0.21
CLN5-201ENST00000377453 ZNF331Q9NQX6 463 aaPredicted RBP16.38■□□□□ 0.21
CLN5-201ENST00000377453 M0QZ24 198 aa16.37■□□□□ 0.21
CLN5-201ENST00000377453 FSTL3O95633 263 aa16.37■□□□□ 0.21
CLN5-201ENST00000377453 CEACAM8P31997 349 aaPredicted RBP16.37■□□□□ 0.21
CLN5-201ENST00000377453 TCRBV4S1A1TA0A5B7 111 aa16.37■□□□□ 0.21
CLN5-201ENST00000377453 NPSP0C0P6 89 aa16.37■□□□□ 0.21
CLN5-201ENST00000377453 LINC00322Q6ZN03 302 aaPredicted RBP16.37■□□□□ 0.21
CLN5-201ENST00000377453 TCF24Q7RTU0 167 aa16.37■□□□□ 0.21
CLN5-201ENST00000377453 C18orf32Q8TCD1 76 aa16.37■□□□□ 0.21
CLN5-201ENST00000377453 ASCL2Q99929 193 aa16.37■□□□□ 0.21
CLN5-201ENST00000377453 MRPL32Q9BYC8 188 aaKnown RBP16.37■□□□□ 0.21
CLN5-201ENST00000377453 PPIAL4EA0A075B759 164 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 PPIAL4DF5H284 164 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 MT-ND6P03923 174 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 THBDP07204 575 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 PPIAL4FP0DN26 164 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 TNXAQ16473 311 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 TMEM108Q6UXF1 575 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 SPACA3Q8IXA5 215 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 PNKDQ8N490 385 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 OR4C13Q8NGP0 309 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 TMEM167AQ8TBQ9 72 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 HLA-DQA1P01909 254 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 RPLP1P05386 114 aaKnown RBP16.36■□□□□ 0.21
CLN5-201ENST00000377453 MMDQ15546 238 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 MRGPRG-AS1Q2M3A8 158 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 CACNG8Q8WXS5 425 aa16.36■□□□□ 0.21
CLN5-201ENST00000377453 SH2D7A6NKC9 451 aaPredicted RBP16.35■□□□□ 0.21
CLN5-201ENST00000377453 TMEM178BH3BS89 294 aa16.35■□□□□ 0.21
CLN5-201ENST00000377453 TNFRSF1AP19438 455 aa16.35■□□□□ 0.21
CLN5-201ENST00000377453 OR10J3Q5JRS4 329 aa16.35■□□□□ 0.21
CLN5-201ENST00000377453 TMEM208Q9BTX3 173 aa16.35■□□□□ 0.21
CLN5-201ENST00000377453 SLC25A5P05141 298 aaKnown RBP16.35■□□□□ 0.21
CLN5-201ENST00000377453 PMCHL1Q16048 86 aa16.35■□□□□ 0.21
CLN5-201ENST00000377453 KIR3DL3Q8N743 410 aa16.35■□□□□ 0.21
CLN5-201ENST00000377453 MBD6Q96DN6 1003 aa16.35■□□□□ 0.21
CLN5-201ENST00000377453 C19orf24Q9BVV8 132 aa16.35■□□□□ 0.21
CLN5-201ENST00000377453 TP73-AS1Q9UF72 201 aa16.35■□□□□ 0.21
CLN5-201ENST00000377453 PGPA6NDG6 321 aa16.34■□□□□ 0.21
CLN5-201ENST00000377453 HIGD1CA8MV81 97 aa16.34■□□□□ 0.21
CLN5-201ENST00000377453 FAM87AP0C7U9 286 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms