RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CRYGCP07315 174 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 CEACAM3P40198 252 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 GNG4P50150 75 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 MMDQ15546 238 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 PVRIGQ6DKI7 326 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 OR10D4PQ8NGN7 298 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 EAF1Q96JC9 268 aaPredicted RBP16.16■□□□□ 0.18
VSX1-202ENST00000376709 IGHV3-21A0A0B4J1V1 117 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 TMEM8BA6NDV4 472 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 TEX22C9J3V5 150 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 CDKN1AP38936 164 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 FOXL1Q12952 345 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 KLRD1Q13241 179 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 RUSC1-AS1Q66K80 236 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 PATE2Q6UY27 113 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 BTF3L4Q96K17 158 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 F11RQ9Y624 299 aaKnown RBP16.16■□□□□ 0.18
VSX1-202ENST00000376709 LY96Q9Y6Y9 160 aa16.16■□□□□ 0.18
VSX1-202ENST00000376709 C19orf84I3L1E1 186 aa16.15■□□□□ 0.18
VSX1-202ENST00000376709 FCN1O00602 326 aa16.15■□□□□ 0.18
VSX1-202ENST00000376709 TYMSP04818 313 aa16.15■□□□□ 0.18
VSX1-202ENST00000376709 CENPWQ5EE01 88 aa16.15■□□□□ 0.18
VSX1-202ENST00000376709 ZNF320A2RRD8 509 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 CNIH1O95406 144 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 PYYP10082 97 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 ORM2P19652 201 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 GPR6P46095 362 aaPredicted RBP16.14■□□□□ 0.17
VSX1-202ENST00000376709 LINC00305Q7Z4B0 112 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 TMEM116Q8NCL8 245 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 PAXXQ9BUH6 204 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 PITPNC1Q9UKF7 332 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 FABP4P15090 132 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 PRTN3P24158 256 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 LGALS4P56470 323 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 OR1B1Q8NGR6 318 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 TRGV9Q99603 122 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 OR51M1Q9H341 326 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 UBTD1Q9HAC8 227 aa16.14■□□□□ 0.17
VSX1-202ENST00000376709 ACTL10Q5JWF8 245 aa16.13■□□□□ 0.17
VSX1-202ENST00000376709 CDPF1Q6NVV7 123 aa16.13■□□□□ 0.17
VSX1-202ENST00000376709 LHFPL4Q7Z7J7 247 aa16.13■□□□□ 0.17
VSX1-202ENST00000376709 ASH1LQ9NR48 2969 aaKnown RBP16.13■□□□□ 0.17
VSX1-202ENST00000376709 ACACBO00763 2458 aa16.13■□□□□ 0.17
VSX1-202ENST00000376709 A0A1W2PRD5 423 aa16.13■□□□□ 0.17
VSX1-202ENST00000376709 A0A1W2PRF3 423 aa16.13■□□□□ 0.17
VSX1-202ENST00000376709 A0A1W2PRM7 423 aa16.13■□□□□ 0.17
VSX1-202ENST00000376709 ERVFC1-1P60608 527 aa16.12■□□□□ 0.17
VSX1-202ENST00000376709 ODF3BA8MYP8 253 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 LINC00587B1AMM8 73 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 NBR2O15453 112 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 NDUFS7O75251 213 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 TIGITQ495A1 244 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 CFHR4Q92496 578 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 PERPQ96FX8 193 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 SLC17A3O00476 420 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 CD24P25063 80 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 OR5I1Q13606 314 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 HES1Q14469 280 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 TMEM183AQ8IXX5 376 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 DMRT1Q9Y5R6 373 aa16.11■□□□□ 0.17
VSX1-202ENST00000376709 IGFBPL1Q8WX77 278 aa16.1■□□□□ 0.17
VSX1-202ENST00000376709 HIST1H2BLQ99880 126 aa16.1■□□□□ 0.17
VSX1-202ENST00000376709 XKRY2A2RUG3 117 aa16.1■□□□□ 0.17
VSX1-202ENST00000376709 PAX2Q02962 417 aa16.1■□□□□ 0.17
VSX1-202ENST00000376709 SSX2Q16385 188 aa16.1■□□□□ 0.17
VSX1-202ENST00000376709 VMO1Q7Z5L0 202 aa16.1■□□□□ 0.17
VSX1-202ENST00000376709 STXBP6Q8NFX7 210 aa16.1■□□□□ 0.17
VSX1-202ENST00000376709 IL36BQ9NZH7 164 aa16.1■□□□□ 0.17
VSX1-202ENST00000376709 FXYD5Q96DB9 178 aa16.09■□□□□ 0.17
VSX1-202ENST00000376709 SRSF8Q9BRL6 282 aaKnown RBP16.09■□□□□ 0.17
VSX1-202ENST00000376709 WNT10AQ9GZT5 417 aa16.09■□□□□ 0.17
VSX1-202ENST00000376709 GSX1Q9H4S2 264 aaPredicted RBP16.09■□□□□ 0.17
VSX1-202ENST00000376709 TRAPPC1Q9Y5R8 145 aa16.09■□□□□ 0.17
VSX1-202ENST00000376709 HYPMO75409 117 aa16.09■□□□□ 0.17
VSX1-202ENST00000376709 PACRGQ96M98 296 aaPredicted RBP16.09■□□□□ 0.17
VSX1-202ENST00000376709 SNRPCP09234 159 aaKnown RBP16.08■□□□□ 0.16
VSX1-202ENST00000376709 C1orf122Q6ZSJ8 110 aa16.08■□□□□ 0.16
VSX1-202ENST00000376709 ABCA1O95477 2261 aa16.08■□□□□ 0.16
VSX1-202ENST00000376709 ZFP36P26651 326 aaKnown RBP16.07■□□□□ 0.16
VSX1-202ENST00000376709 RPL15P61313 204 aaKnown RBP16.07■□□□□ 0.16
VSX1-202ENST00000376709 CTAG1AP78358 180 aa16.07■□□□□ 0.16
VSX1-202ENST00000376709 KIR3DL3Q8N743 410 aa16.07■□□□□ 0.16
VSX1-202ENST00000376709 WNK2Q9Y3S1 2297 aa16.07■□□□□ 0.16
VSX1-202ENST00000376709 A6NNC1 897 aa16.07■□□□□ 0.16
VSX1-202ENST00000376709 MGST1P10620 155 aaKnown RBP16.07■□□□□ 0.16
VSX1-202ENST00000376709 FXYD3Q14802 87 aa16.07■□□□□ 0.16
VSX1-202ENST00000376709 RPEL1Q2QD12 228 aa16.07■□□□□ 0.16
VSX1-202ENST00000376709 CCDC144NLQ6NUI1 221 aa16.07■□□□□ 0.16
VSX1-202ENST00000376709 ZNF329Q86UD4 541 aa16.07■□□□□ 0.16
VSX1-202ENST00000376709 NPBQ8NG41 125 aa16.07■□□□□ 0.16
VSX1-202ENST00000376709 COL12A1Q99715 3063 aa16.07■□□□□ 0.16
VSX1-202ENST00000376709 I3L2K1 104 aa16.06■□□□□ 0.16
VSX1-202ENST00000376709 NDUFA3O95167 84 aa16.06■□□□□ 0.16
VSX1-202ENST00000376709 CNN1P51911 297 aaKnown RBP16.06■□□□□ 0.16
VSX1-202ENST00000376709 BLNKQ8WV28 456 aa16.06■□□□□ 0.16
VSX1-202ENST00000376709 IGF2BP2-AS1Q96M15 143 aa16.06■□□□□ 0.16
VSX1-202ENST00000376709 FAM103A1Q9BTL3 118 aaKnown RBP16.06■□□□□ 0.16
VSX1-202ENST00000376709 CDC42EP3Q9UKI2 254 aa16.06■□□□□ 0.16
VSX1-202ENST00000376709 V9GYV3 84 aa16.06■□□□□ 0.16
VSX1-202ENST00000376709 FLNCQ14315 2725 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms