RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 DNAJC4Q9NNZ3 241 aa11.23□□□□□ -0.61
CPT1A-202ENST00000376618 TECRQ9NZ01 308 aaKnown RBP11.23□□□□□ -0.61
CPT1A-202ENST00000376618 MYO18BQ8IUG5 2567 aa11.23□□□□□ -0.61
CPT1A-202ENST00000376618 ZANQ9Y493 2812 aa11.23□□□□□ -0.61
CPT1A-202ENST00000376618 A0A1W2PPR1 153 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 LINC00305Q7Z4B0 112 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 ST6GALNAC3Q8NDV1 305 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 FKBP11Q9NYL4 201 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 IGHV1-3A0A0C4DH29 117 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 IGLC7A0M8Q6 106 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 VSTM5A8MXK1 200 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 COX7A2P2O60397 106 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 SRP14P37108 136 aaKnown RBP11.22□□□□□ -0.61
CPT1A-202ENST00000376618 RBPJQ06330 500 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 MRPL54Q6P161 138 aaKnown RBP11.22□□□□□ -0.61
CPT1A-202ENST00000376618 PDPNQ86YL7 162 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 C8orf88P0DMB2 117 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 CNN1P51911 297 aaKnown RBP11.22□□□□□ -0.61
CPT1A-202ENST00000376618 MMD2Q8IY49 270 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 NGBQ9NPG2 151 aa11.22□□□□□ -0.61
CPT1A-202ENST00000376618 ELOA3CA0A087WX78 387 aaPredicted RBP11.21□□□□□ -0.61
CPT1A-202ENST00000376618 B9A039 149 aa11.21□□□□□ -0.61
CPT1A-202ENST00000376618 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.61
CPT1A-202ENST00000376618 IGLV2-8P01709 118 aa11.21□□□□□ -0.61
CPT1A-202ENST00000376618 TMEM249Q2WGJ8 235 aa11.21□□□□□ -0.61
CPT1A-202ENST00000376618 C10orf113Q5VZT2 155 aa11.21□□□□□ -0.61
CPT1A-202ENST00000376618 BCL6BQ8N143 479 aaPredicted RBP11.21□□□□□ -0.61
CPT1A-202ENST00000376618 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.61
CPT1A-202ENST00000376618 V9GYV3 84 aa11.21□□□□□ -0.61
CPT1A-202ENST00000376618 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.21□□□□□ -0.621e-5■■■■□ 21.5
CPT1A-202ENST00000376618 NDUFS6O75380 124 aaKnown RBP11.21□□□□□ -0.62
CPT1A-202ENST00000376618 IGLV1-47P01700 117 aa11.21□□□□□ -0.62
CPT1A-202ENST00000376618 HIST1H1BP16401 226 aaKnown RBP11.21□□□□□ -0.62
CPT1A-202ENST00000376618 CDKN1AP38936 164 aa11.21□□□□□ -0.62
CPT1A-202ENST00000376618 RAB4BP61018 213 aa11.21□□□□□ -0.62
CPT1A-202ENST00000376618 PLGLAQ15195 96 aa11.21□□□□□ -0.62
CPT1A-202ENST00000376618 USP9XQ93008 2570 aaPredicted RBP11.2□□□□□ -0.62
CPT1A-202ENST00000376618 CORTO00230 105 aa11.2□□□□□ -0.62
CPT1A-202ENST00000376618 ISLRO14498 428 aa11.2□□□□□ -0.62
CPT1A-202ENST00000376618 MRPL41Q8IXM3 137 aaKnown RBP11.2□□□□□ -0.62
CPT1A-202ENST00000376618 TNFRSF19Q9NS68 423 aa11.2□□□□□ -0.62
CPT1A-202ENST00000376618 KAAG1Q9UBP8 84 aa11.2□□□□□ -0.62
CPT1A-202ENST00000376618 MT-CO2P00403 227 aa11.2□□□□□ -0.62
CPT1A-202ENST00000376618 S100A12P80511 92 aa11.2□□□□□ -0.62
CPT1A-202ENST00000376618 FOXL1Q12952 345 aa11.2□□□□□ -0.62
CPT1A-202ENST00000376618 VMA21Q3ZAQ7 101 aa11.2□□□□□ -0.62
CPT1A-202ENST00000376618 OR1L6Q8NGR2 347 aa11.2□□□□□ -0.62
CPT1A-202ENST00000376618 SIGLEC9Q9Y336 463 aa11.2□□□□□ -0.62
CPT1A-202ENST00000376618 IGSF10Q6WRI0 2623 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 SNURFLB1AK76 121 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 TIMM23O14925 209 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 CA7P43166 264 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 RPEQ96AT9 228 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 ACACBO00763 2458 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 IGHV3OR16-8A0A075B7F1 116 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 FSTL3O95633 263 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 IGHV3-23P01764 117 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 LINC00310P59036 64 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 TDRG1Q3Y452 100 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 ZNF664Q8N3J9 261 aa11.19□□□□□ -0.62
CPT1A-202ENST00000376618 MRPL18Q9H0U6 180 aaKnown RBP11.19□□□□□ -0.62
CPT1A-202ENST00000376618 TRAV8-1A0A0A6YYK1 113 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 TCRBV4S1A1TA0A5B7 111 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 TYMSP04818 313 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 RPL27AP46776 148 aaKnown RBP11.18□□□□□ -0.62
CPT1A-202ENST00000376618 PPP1R27Q86WC6 154 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 IL36BQ9NZH7 164 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 MSRB2Q9Y3D2 182 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 SSX2Q16385 188 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 VSTM2AQ8TAG5 236 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 CLEC7AQ9BXN2 247 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 TMEM167BQ9NRX6 74 aa11.18□□□□□ -0.62
CPT1A-202ENST00000376618 AMMECR1Q9Y4X0 333 aaPredicted RBP11.18□□□□□ -0.62
CPT1A-202ENST00000376618 A0A1W2PN81 502 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 HES1Q14469 280 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 MMDQ15546 238 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 DYNAPQ8N1N2 210 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 C11orf52Q96A22 123 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 FXYD5Q96DB9 178 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 C17orf77Q96MU5 243 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 RNF114Q9Y508 228 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 CSPG4Q6UVK1 2322 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 A6NNC1 897 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 CNIH1O95406 144 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 RBP4P02753 201 aa11.17□□□□□ -0.62
CPT1A-202ENST00000376618 IBA57Q5T440 356 aaKnown RBP11.17□□□□□ -0.62
CPT1A-202ENST00000376618 USP9YO00507 2555 aaPredicted RBP11.17□□□□□ -0.62
CPT1A-202ENST00000376618 A0A087X0M5 115 aa11.16□□□□□ -0.62
CPT1A-202ENST00000376618 IGHV3-35A0A0C4DH35 117 aa11.16□□□□□ -0.62
CPT1A-202ENST00000376618 A0A1B0GX30 115 aa11.16□□□□□ -0.62
CPT1A-202ENST00000376618 TEX22C9J3V5 150 aa11.16□□□□□ -0.62
CPT1A-202ENST00000376618 CASP6P55212 293 aa11.16□□□□□ -0.62
CPT1A-202ENST00000376618 TAS2R45P59539 299 aa11.16□□□□□ -0.62
CPT1A-202ENST00000376618 LYZP61626 148 aa11.16□□□□□ -0.62
CPT1A-202ENST00000376618 LCN2P80188 198 aa11.16□□□□□ -0.62
CPT1A-202ENST00000376618 NHLH1Q02575 133 aa11.16□□□□□ -0.62
CPT1A-202ENST00000376618 RPEL1Q2QD12 228 aa11.16□□□□□ -0.62
CPT1A-202ENST00000376618 LINC00322Q6ZN03 302 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms