RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 ETFRF1Q6IPR1 90 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 RNASEH2CQ8TDP1 164 aaKnown RBP13.43□□□□□ -0.26
HDAC6-202ENST00000376610 RBPMSQ93062 196 aaKnown RBP13.43□□□□□ -0.26
HDAC6-202ENST00000376610 NAA60Q9H7X0 242 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 CACFD1Q9UGQ2 172 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 TBC1D24Q9ULP9 559 aa13.43□□□□□ -0.26
HDAC6-202ENST00000376610 HECTD4Q9Y4D8 3996 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 TRAV10A0A0B4J240 114 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 ZNF705EA8MWA4 302 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-202ENST00000376610 DISC1C4P0D8 188 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 GABARAPH6UMI1 98 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 GABARAPO95166 117 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 GIG44P09565 113 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-202ENST00000376610 IGLC1P0CG04 106 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 C4BPBP20851 252 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 NUTF2P61970 127 aaKnown RBP13.42□□□□□ -0.26
HDAC6-202ENST00000376610 SNRPD3P62318 126 aaKnown RBP13.42□□□□□ -0.26
HDAC6-202ENST00000376610 MRPS10P82664 201 aaKnown RBP13.42□□□□□ -0.26
HDAC6-202ENST00000376610 SURF2Q15527 256 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-202ENST00000376610 AARDQ4LEZ3 155 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 C2orf83Q53S99 150 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 PSMG4Q5JS54 123 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 PRSS54Q6PEW0 395 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 Q6ZRM9 215 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 NOXA1Q86UR1 476 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 SLC24A4Q8NFF2 622 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 CACNG5Q9UF02 275 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 APLNQ9ULZ1 77 aa13.42□□□□□ -0.26
HDAC6-202ENST00000376610 RGS5O15539 181 aa13.41□□□□□ -0.26
HDAC6-202ENST00000376610 GSTZ1O43708 216 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-202ENST00000376610 RBMY1A1P0DJD3 496 aaKnown RBP13.41□□□□□ -0.26
HDAC6-202ENST00000376610 RBMY1CP0DJD4 496 aa13.41□□□□□ -0.26
HDAC6-202ENST00000376610 YPEL3P61236 119 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-202ENST00000376610 PRR20EP86478 221 aa13.41□□□□□ -0.26
HDAC6-202ENST00000376610 PRR20CP86479 221 aa13.41□□□□□ -0.26
HDAC6-202ENST00000376610 PRR20DP86480 221 aa13.41□□□□□ -0.26
HDAC6-202ENST00000376610 PRR20BP86481 221 aa13.41□□□□□ -0.26
HDAC6-202ENST00000376610 PRR20AP86496 221 aa13.41□□□□□ -0.26
HDAC6-202ENST00000376610 RBMY1FQ15415 496 aaKnown RBP13.41□□□□□ -0.26
HDAC6-202ENST00000376610 GPR107Q5VW38 600 aa13.41□□□□□ -0.26
HDAC6-202ENST00000376610 GLYATL2Q8WU03 294 aa13.41□□□□□ -0.26
HDAC6-202ENST00000376610 C1QTNF4Q9BXJ3 329 aa13.41□□□□□ -0.26
HDAC6-202ENST00000376610 IL4P05112 153 aa13.4□□□□□ -0.26
HDAC6-202ENST00000376610 CTF1Q16619 201 aa13.4□□□□□ -0.26
HDAC6-202ENST00000376610 TMEM268Q5VZI3 342 aa13.4□□□□□ -0.26
HDAC6-202ENST00000376610 C16orf54Q6UWD8 224 aa13.4□□□□□ -0.26
HDAC6-202ENST00000376610 Q6ZTC4 211 aa13.4□□□□□ -0.26
HDAC6-202ENST00000376610 SELENOHQ8IZQ5 122 aaKnown RBP13.4□□□□□ -0.26
HDAC6-202ENST00000376610 GLMPQ8WWB7 406 aa13.4□□□□□ -0.26
HDAC6-202ENST00000376610 RAB40CQ96S21 281 aa13.4□□□□□ -0.26
HDAC6-202ENST00000376610 NAA50Q9GZZ1 169 aaKnown RBP13.4□□□□□ -0.26
HDAC6-202ENST00000376610 CLEC5AQ9NY25 188 aa13.4□□□□□ -0.26
HDAC6-202ENST00000376610 U3KQE9 123 aa13.4□□□□□ -0.26
HDAC6-202ENST00000376610 NPY1RP25929 384 aa13.39□□□□□ -0.27
HDAC6-202ENST00000376610 FAAP20Q6NZ36 180 aa13.39□□□□□ -0.27
HDAC6-202ENST00000376610 ACY3Q96HD9 319 aa13.39□□□□□ -0.27
HDAC6-202ENST00000376610 RTBDNQ9BSG5 229 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-202ENST00000376610 X6R8D5 127 aa13.39□□□□□ -0.27
HDAC6-202ENST00000376610 IGHV4-4A0A075B6R2 117 aa13.38□□□□□ -0.27
HDAC6-202ENST00000376610 RD3LP0DJH9 198 aa13.38□□□□□ -0.27
HDAC6-202ENST00000376610 SIGLEC15Q6ZMC9 328 aa13.38□□□□□ -0.27
HDAC6-202ENST00000376610 LHFPL5Q8TAF8 219 aa13.38□□□□□ -0.27
HDAC6-202ENST00000376610 GPR146Q96CH1 333 aa13.38□□□□□ -0.27
HDAC6-202ENST00000376610 PRRT1Q99946 306 aa13.38□□□□□ -0.27
HDAC6-202ENST00000376610 SEPSECSQ9HD40 501 aaKnown RBP13.38□□□□□ -0.27
HDAC6-202ENST00000376610 NRN1Q9NPD7 142 aa13.38□□□□□ -0.27
HDAC6-202ENST00000376610 PFDN2Q9UHV9 154 aa13.38□□□□□ -0.27
HDAC6-202ENST00000376610 ELOA3CA0A087WX78 387 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-202ENST00000376610 CRYM-AS1A6NIL9 109 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 FAM90A26D6RGX4 464 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 IFNA10P01566 189 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 AKAIN1P0CW23 69 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 SULT1A3P0DMM9 295 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 SULT1A4P0DMN0 295 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 NUP62P37198 522 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-202ENST00000376610 USF2Q15853 346 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-202ENST00000376610 CSNK1G2-AS1Q8NCQ2 148 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 SMIM4Q8WVI0 70 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 NPIPB3Q92617 1050 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 RNF126Q9BV68 326 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 KCNIP3Q9Y2W7 256 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 TMEM56-RWDD3S4R434 201 aa13.37□□□□□ -0.27
HDAC6-202ENST00000376610 NXPH3O95157 252 aa13.36□□□□□ -0.27
HDAC6-202ENST00000376610 TOMM40O96008 361 aa13.36□□□□□ -0.27
HDAC6-202ENST00000376610 SCGB3A2Q96PL1 93 aa13.36□□□□□ -0.27
HDAC6-202ENST00000376610 RABL2AQ9UBK7 228 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-202ENST00000376610 RABL2BQ9UNT1 228 aa13.36□□□□□ -0.27
HDAC6-202ENST00000376610 GPR132Q9UNW8 380 aa13.36□□□□□ -0.27
HDAC6-202ENST00000376610 HERC2O95714 4834 aa13.36□□□□□ -0.27
HDAC6-202ENST00000376610 BUB3O43684 328 aa13.35□□□□□ -0.27
HDAC6-202ENST00000376610 IL18Q14116 193 aa13.35□□□□□ -0.27
HDAC6-202ENST00000376610 OR4C16Q8NGL9 310 aa13.35□□□□□ -0.27
HDAC6-202ENST00000376610 IL22RA2Q969J5 263 aa13.35□□□□□ -0.27
HDAC6-202ENST00000376610 MIXL1Q9H2W2 232 aa13.35□□□□□ -0.27
HDAC6-202ENST00000376610 XCL2Q9UBD3 114 aa13.35□□□□□ -0.27
HDAC6-202ENST00000376610 U3KQ87 197 aa13.35□□□□□ -0.27
HDAC6-202ENST00000376610 DEFB131BA0A096LNP1 70 aa13.34□□□□□ -0.27
HDAC6-202ENST00000376610 CLVS1Q8IUQ0 354 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-202ENST00000376610 OR51G1Q8NGK1 321 aa13.34□□□□□ -0.27
HDAC6-202ENST00000376610 TMEM170AQ8WVE7 144 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms