RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 OR10J1P30954 320 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 SELENOTP62341 195 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 FAM122CQ6P4D5 195 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 LCN15Q6UWW0 184 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 C5orf56Q8N8D9 126 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 NPIPB3Q92617 1050 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 TMEM68Q96MH6 324 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 SSX3Q99909 188 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 SEC11CQ9BY50 192 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 MOB4Q9Y3A3 225 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 I3L2K1 104 aa16.64■□□□□ 0.25
HLA-C-201ENST00000376228 APELAP0DMC3 54 aa16.64■□□□□ 0.25
HLA-C-201ENST00000376228 KHDC3LQ587J8 217 aa16.64■□□□□ 0.25
HLA-C-201ENST00000376228 ZNF506Q5JVG8 444 aa16.64■□□□□ 0.25
HLA-C-201ENST00000376228 CYP2G1PQ6ZSU1 146 aa16.64■□□□□ 0.25
HLA-C-201ENST00000376228 ACY3Q96HD9 319 aa16.64■□□□□ 0.25
HLA-C-201ENST00000376228 SLC25A33Q9BSK2 321 aa16.64■□□□□ 0.25
HLA-C-201ENST00000376228 EIF5A2Q9GZV4 153 aaKnown RBP16.64■□□□□ 0.25
HLA-C-201ENST00000376228 TMEM231Q9H6L2 316 aa16.64■□□□□ 0.25
HLA-C-201ENST00000376228 TNFRSF19Q9NS68 423 aa16.64■□□□□ 0.25
HLA-C-201ENST00000376228 CARHSP1Q9Y2V2 147 aaKnown RBP16.64■□□□□ 0.25
HLA-C-201ENST00000376228 IGKV1D-37A0A075B6S9 117 aa16.63■□□□□ 0.25
HLA-C-201ENST00000376228 TCRBV4S1A1TA0A5B7 111 aa16.63■□□□□ 0.25
HLA-C-201ENST00000376228 HOXA3O43365 443 aaPredicted RBP16.63■□□□□ 0.25
HLA-C-201ENST00000376228 NDUFS6O75380 124 aaKnown RBP16.63■□□□□ 0.25
HLA-C-201ENST00000376228 MT-CO2P00403 227 aa16.63■□□□□ 0.25
HLA-C-201ENST00000376228 SGMS2Q8NHU3 365 aa16.63■□□□□ 0.25
HLA-C-201ENST00000376228 NARS2Q96I59 477 aaKnown RBP16.63■□□□□ 0.25
HLA-C-201ENST00000376228 TRGV9Q99603 122 aa16.63■□□□□ 0.25
HLA-C-201ENST00000376228 FAM103A1Q9BTL3 118 aaKnown RBP16.63■□□□□ 0.25
HLA-C-201ENST00000376228 SLC25A22Q9H936 323 aa16.63■□□□□ 0.25
HLA-C-201ENST00000376228 STAB1Q9NY15 2570 aa16.63■□□□□ 0.25
HLA-C-201ENST00000376228 A0A1B0GV50 99 aa16.62■□□□□ 0.25
HLA-C-201ENST00000376228 A0A1W2PPV4 95 aa16.62■□□□□ 0.25
HLA-C-201ENST00000376228 A6NDX4 124 aa16.62■□□□□ 0.25
HLA-C-201ENST00000376228 DEFA4P12838 97 aa16.62■□□□□ 0.25
HLA-C-201ENST00000376228 TAGLN2P37802 199 aaKnown RBP16.62■□□□□ 0.25
HLA-C-201ENST00000376228 RND2P52198 227 aa16.62■□□□□ 0.25
HLA-C-201ENST00000376228 CCDC28AQ8IWP9 274 aa16.62■□□□□ 0.25
HLA-C-201ENST00000376228 MRPL36Q9P0J6 103 aaKnown RBP16.62■□□□□ 0.25
HLA-C-201ENST00000376228 IGLV11-55A0A075B6I3 123 aa16.61■□□□□ 0.25
HLA-C-201ENST00000376228 C9JQL5 133 aa16.61■□□□□ 0.25
HLA-C-201ENST00000376228 RHOBP62745 196 aa16.61■□□□□ 0.25
HLA-C-201ENST00000376228 GCSAMLQ5JQS6 135 aa16.61■□□□□ 0.25
HLA-C-201ENST00000376228 C19orf35Q6ZS72 473 aa16.61■□□□□ 0.25
HLA-C-201ENST00000376228 C16orf82Q7Z2V1 217 aa16.61■□□□□ 0.25
HLA-C-201ENST00000376228 OR4X1Q8NH49 305 aa16.61■□□□□ 0.25
HLA-C-201ENST00000376228 PITPNC1Q9UKF7 332 aa16.61■□□□□ 0.25
HLA-C-201ENST00000376228 LOC102723971A0A1B0GUV8 181 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 K7EIM0 57 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 IFNA1P01562 189 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 HSPB1P04792 205 aaKnown RBP16.6■□□□□ 0.25
HLA-C-201ENST00000376228 STAG3L2P0CL84 134 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 STAG3L3P0CL85 134 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 ADCYAP1P18509 176 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 CRIP2P52943 208 aaPredicted RBP16.6■□□□□ 0.25
HLA-C-201ENST00000376228 FANCD2OSQ96PS1 177 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 HSPB9Q9BQS6 159 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 M0QZK8 103 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 SFTA3P0C7M3 94 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 PSMB3P49720 205 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 PPT1P50897 306 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 FGF8P55075 233 aaPredicted RBP16.6■□□□□ 0.25
HLA-C-201ENST00000376228 ICAM4Q14773 271 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 Q6YL49 198 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 FAM110DQ8TAY7 271 aaPredicted RBP16.6■□□□□ 0.25
HLA-C-201ENST00000376228 RNF2Q99496 336 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 SLC35B3Q9H1N7 401 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 PRDM13Q9H4Q3 707 aa16.6■□□□□ 0.25
HLA-C-201ENST00000376228 ANK2Q01484 3957 aa16.59■□□□□ 0.25
HLA-C-201ENST00000376228 PSMB11A5LHX3 300 aa16.59■□□□□ 0.25
HLA-C-201ENST00000376228 ZFP92A6NM28 416 aa16.59■□□□□ 0.25
HLA-C-201ENST00000376228 F8W036 122 aa16.59■□□□□ 0.25
HLA-C-201ENST00000376228 AMY1AP04745 511 aa16.59■□□□□ 0.25
HLA-C-201ENST00000376228 RNASE1P07998 156 aaKnown RBP16.59■□□□□ 0.25
HLA-C-201ENST00000376228 BCL2P10415 239 aa16.59■□□□□ 0.25
HLA-C-201ENST00000376228 HIST1H1BP16401 226 aaKnown RBP16.59■□□□□ 0.25
HLA-C-201ENST00000376228 SLC35E3Q7Z769 313 aa16.59■□□□□ 0.25
HLA-C-201ENST00000376228 GATAD1Q8WUU5 269 aa16.59■□□□□ 0.25
HLA-C-201ENST00000376228 RARRES2Q99969 163 aa16.59■□□□□ 0.25
HLA-C-201ENST00000376228 THYN1Q9P016 225 aa16.59■□□□□ 0.25
HLA-C-201ENST00000376228 H3BUX3 64 aa16.58■□□□□ 0.24
HLA-C-201ENST00000376228 OR5G3P0C626 314 aa16.58■□□□□ 0.24
HLA-C-201ENST00000376228 HAGHQ16775 308 aa16.58■□□□□ 0.24
HLA-C-201ENST00000376228 AKIRIN2Q53H80 203 aa16.58■□□□□ 0.24
HLA-C-201ENST00000376228 MANBALQ9NQG1 85 aa16.58■□□□□ 0.24
HLA-C-201ENST00000376228 GNG13Q9P2W3 67 aa16.58■□□□□ 0.24
HLA-C-201ENST00000376228 APOC3P02656 99 aa16.57■□□□□ 0.24
HLA-C-201ENST00000376228 C12orf54Q6X4T0 127 aa16.57■□□□□ 0.24
HLA-C-201ENST00000376228 MRPL32Q9BYC8 188 aaKnown RBP16.57■□□□□ 0.24
HLA-C-201ENST00000376228 VAX2Q9UIW0 290 aa16.57■□□□□ 0.24
HLA-C-201ENST00000376228 FUT9Q9Y231 359 aa16.57■□□□□ 0.24
HLA-C-201ENST00000376228 TENM1Q9UKZ4 2725 aa16.57■□□□□ 0.24
HLA-C-201ENST00000376228 TMEM89A2RUT3 159 aa16.56■□□□□ 0.24
HLA-C-201ENST00000376228 CLDN34H7C241 214 aa16.56■□□□□ 0.24
HLA-C-201ENST00000376228 ATP6V0E1O15342 81 aa16.56■□□□□ 0.24
HLA-C-201ENST00000376228 CLN5O75503 358 aa16.56■□□□□ 0.24
HLA-C-201ENST00000376228 CXorf1O96002 111 aa16.56■□□□□ 0.24
HLA-C-201ENST00000376228 IGHV3-48P01763 117 aa16.56■□□□□ 0.24
HLA-C-201ENST00000376228 SRP19P09132 144 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms