RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 IGFBP2P18065 325 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 LCN12Q6JVE5 192 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 MUC15Q8N387 334 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 C8orf31Q8N9H6 132 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 OR5B3Q8NH48 314 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 TOMM40O96008 361 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 IGHV1-8P0DP01 117 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 SLC35B1P78383 322 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 MOB3BQ86TA1 216 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 OR9G1Q8NH87 305 aa11.3□□□□□ -0.6
MSH5-202ENST00000375740 PDE6DO43924 150 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 STAG3L2P0CL84 134 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 STAG3L3P0CL85 134 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 ARL14EPLP0DKL9 152 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 Q0VG73 95 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 RAB31Q13636 194 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 MLANAQ16655 118 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 KCNIP2Q9NS61 270 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 A0A1W2PS18 150 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 CBY3A6NI87 242 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 C2orf83Q53S99 150 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 OR4C13Q8NGP0 309 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 UHRF2Q96PU4 802 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 COMMD5Q9GZQ3 224 aa11.29□□□□□ -0.6
MSH5-202ENST00000375740 E7EUB6 86 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 FNDC10F2Z333 226 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 RNASE2P10153 161 aaKnown RBP11.28□□□□□ -0.6
MSH5-202ENST00000375740 TSPOP30536 169 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 RPL8P62917 257 aaKnown RBP11.28□□□□□ -0.6
MSH5-202ENST00000375740 ADORA2A-AS1P86434 159 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 SPATA31B1PQ5VZV4 182 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 FAM71F2Q6NXP2 309 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 PDPNQ86YL7 162 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 ZNF738Q8NE65 137 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 SEPSECSQ9HD40 501 aaKnown RBP11.28□□□□□ -0.6
MSH5-202ENST00000375740 NDUFA4L2Q9NRX3 87 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 IL36BQ9NZH7 164 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 RALYQ9UKM9 306 aaKnown RBP11.28□□□□□ -0.6
MSH5-202ENST00000375740 ZNF253O75346 499 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 CXorf1O96002 111 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 LINC00869P0C866 280 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 DLX1P56177 255 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 LGALS4P56470 323 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 PRR20EP86478 221 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 PRR20CP86479 221 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 PRR20DP86480 221 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 PRR20BP86481 221 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 PRR20AP86496 221 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 ZNF672Q499Z4 452 aaPredicted RBP11.28□□□□□ -0.6
MSH5-202ENST00000375740 FBLN7Q53RD9 439 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 NIT1Q86X76 327 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 OR8I2Q8N0Y5 310 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 TMEM133Q9H2Q1 129 aa11.28□□□□□ -0.6
MSH5-202ENST00000375740 OR1L8Q8NGR8 309 aa11.27□□□□□ -0.6
MSH5-202ENST00000375740 TMEM167AQ8TBQ9 72 aa11.27□□□□□ -0.6
MSH5-202ENST00000375740 WASHC3Q9Y3C0 194 aa11.27□□□□□ -0.6
MSH5-202ENST00000375740 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
MSH5-202ENST00000375740 USF1P22415 310 aaPredicted RBP11.27□□□□□ -0.61
MSH5-202ENST00000375740 ZNF137PP52743 207 aa11.27□□□□□ -0.61
MSH5-202ENST00000375740 ATP5IP56385 69 aaPredicted RBP11.27□□□□□ -0.61
MSH5-202ENST00000375740 RHOBP62745 196 aa11.27□□□□□ -0.61
MSH5-202ENST00000375740 OR4C5Q8NGB2 326 aa11.27□□□□□ -0.61
MSH5-202ENST00000375740 RITA1Q96K30 269 aa11.27□□□□□ -0.61
MSH5-202ENST00000375740 IGKV1OR2-108A0A075B7D4 117 aa11.26□□□□□ -0.61
MSH5-202ENST00000375740 IGHV2-70DA0A0C4DH43 119 aa11.26□□□□□ -0.61
MSH5-202ENST00000375740 FOXH1O75593 365 aa11.26□□□□□ -0.61
MSH5-202ENST00000375740 PRB3Q04118 309 aaPredicted RBP11.26□□□□□ -0.61
MSH5-202ENST00000375740 ZNF841Q6ZN19 808 aa11.26□□□□□ -0.61
MSH5-202ENST00000375740 NAT8BQ9UHF3 227 aa11.26□□□□□ -0.61
MSH5-202ENST00000375740 YTHDF2Q9Y5A9 579 aaKnown RBP11.26□□□□□ -0.61
MSH5-202ENST00000375740 ERHP84090 104 aaKnown RBP11.26□□□□□ -0.61
MSH5-202ENST00000375740 MMD2Q8IY49 270 aa11.26□□□□□ -0.61
MSH5-202ENST00000375740 OR4A5Q8NH83 315 aa11.26□□□□□ -0.61
MSH5-202ENST00000375740 VSTM2AQ8TAG5 236 aa11.26□□□□□ -0.61
MSH5-202ENST00000375740 IGF2RP11717 2491 aa11.26□□□□□ -0.61
MSH5-202ENST00000375740 IGHV3-72A0A0B4J1Y9 119 aa11.25□□□□□ -0.61
MSH5-202ENST00000375740 CGB1A6NKQ9 187 aa11.25□□□□□ -0.61
MSH5-202ENST00000375740 ENSAO43768 121 aaKnown RBP11.25□□□□□ -0.61
MSH5-202ENST00000375740 PPOXP50336 477 aa11.25□□□□□ -0.61
MSH5-202ENST00000375740 PRRX1P54821 245 aa11.25□□□□□ -0.61
MSH5-202ENST00000375740 C10orf55Q5SWW7 151 aa11.25□□□□□ -0.61
MSH5-202ENST00000375740 ZNF430Q9H8G1 570 aaPredicted RBP11.25□□□□□ -0.61
MSH5-202ENST00000375740 LOC102724200A0A096LPH7 203 aaPredicted RBP11.25□□□□□ -0.61
MSH5-202ENST00000375740 NTF3P20783 257 aa11.25□□□□□ -0.61
MSH5-202ENST00000375740 GATA2P23769 480 aaPredicted RBP11.25□□□□□ -0.61
MSH5-202ENST00000375740 GCHFRP30047 84 aa11.25□□□□□ -0.61
MSH5-202ENST00000375740 MC5RP33032 325 aa11.25□□□□□ -0.61
MSH5-202ENST00000375740 CD69Q07108 199 aa11.25□□□□□ -0.61
MSH5-202ENST00000375740 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
MSH5-202ENST00000375740 SLC25A17O43808 307 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 ACTL6BO94805 426 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 OR4P4Q8NGL7 312 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 CLEC7AQ9BXN2 247 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 DLL1O00548 723 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 TCL1AP56279 114 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
MSH5-202ENST00000375740 LDLRAD2Q5SZI1 272 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms